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Machine learning and artificial intelligence (AI) are powerful
tools that create predictive models, extract information, and help
make complex decisions. They do this by examining an enormous
quantity of labeled training data to find patterns too complex for
human observation. However, in many real-world applications,
well-labeled data can be difficult, expensive, or even impossible
to obtain. In some cases, such as when identifying rare objects
like new archeological sites or secret enemy military facilities in
satellite images, acquiring labels could require months of trained
human observers at incredible expense. Other times, as when
attempting to predict disease infection during a pandemic such as
COVID-19, reliable true labels may be nearly impossible to obtain
early on due to lack of testing equipment or other factors. In that
scenario, identifying even a small amount of truly negative data
may be impossible due to the high false negative rate of available
tests. In such problems, it is possible to label a small subset of
data as belonging to the class of interest though it is impractical
to manually label all data not of interest. We are left with a
small set of positive labeled data and a large set of unknown and
unlabeled data. Readers will explore this Positive and Unlabeled
learning (PU learning) problem in depth. The book rigorously
defines the PU learning problem, discusses several common
assumptions that are frequently made about the problem and their
implications, and considers how to evaluate solutions for this
problem before describing several of the most popular algorithms to
solve this problem. It explores several uses for PU learning
including applications in biological/medical, business, security,
and signal processing. This book also provides high-level summaries
of several related learning problems such as one-class
classification, anomaly detection, and noisy learning and their
relation to PU learning.
MicroRNAs (miRNAs) are a member of the family of non-coding RNA
molecules, and consist of small conserved sequences between 19-25
nucleotides in length that are responsible for regulating many
cellular functions by affecting a wide range of messenger RNAs in a
sequence specific manner. Fundamental biological processes like
cell proliferation and growth, stress resistance, tumorigenesis,
fat metabolism, and neural development have all been shown to be
governed by miRNAs. miRNAs carry out the post-transcriptional
silencing of gene expression via targeting the 30-untranslated
region (UTR) of the complementary mRNA sequence. The dysregulation
of the expression levels of various miRNAs is typical of tumor
cells, and has been associated with tumor progression and poor
prognosis. Many miRNAs are up-regulated in cancer, where they can
silence tumor suppressor genes such as apoptosis and immune
response associated genes. Therefore, it is possible to profile the
expression levels of miRNAs as biomarkers, in order to diagnose
cancer and noncancerous diseases. Moreover, cancer detection in the
early stages is crucial in clinical situations. Characterization of
miRNAs in serum, plasma, and other bodily fluids, and understanding
their stability against RNase degradation, is important to assess
their suitability as biomarkers and diagnostic tools. Exosomes play
an important role in inter-cellular communications, and these
nanosized particles have various functions in diverse physiological
pathways, in normal as well as abnormal cells. Exosomes can carry
diverse cargos such as mRNAs, miRNAs, and proteins that transfer
information between donor and recipient cells. Furthermore, uptake
of exosomes and their cargos may promote or suppress various
molecular and cellular pathways, which alter the cellular behavior.
Many reports have discussed the role of exosomes released from
cancer cells on the progression of cancer at various stages.
Exosomes and their cargos may affect the growth of the tumor,
metastasis, drug resistance, immune system function, as well as
angiogenesis. Therefore, exosomes have been explored as diagnostic
biomarkers in many cancers. Moreover, exosomes can be used as
biological vehicles to deliver different drugs and agents like
doxorubicin (DOX), miRNAs, and siRNAs. The present book covers the
role of exosomes and micro-RNAs in the pathogenesis and treatment
of various diseases.
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