Life of a Cell and its Analysis: Structure and Function of the
Nucleus and Cell Organelles.- Transcription and the Control of Gene
Expression.- RNA Processing and Translation.- DNA Replication,
Recombination, and Repair.- Cell signalling.- Epigenetics of
Spermiogenesis: combining in silico and proteomic approaches in the
mouse model.- Genomic Tools for Analyzing Transcriptional
Regulatory Networks.- Statistical Tools and Their Application:
Probability and Hypothesis Testing.- Stochastic Models for
Biological Patterns.- Population Genetics.- Statistical tools for
gene expression analysis and system biology and related web
resources.- Transcriptome Analysis: What goes in is what comes out:
How to design and implement a successful microarray experiment.-
Tools and Approaches for an End-to-End Expression Array Analysis.-
Analysis of alternative splicing with microarrays.- Structural and
Functional Sequence Analysis: An Introduction to Multiple Sequence
Alignment - and the T-Coffee Shop. Beyond just aligning sequences:
how good can you make your alignment, and so what?.- A spectrum of
phylogenetic-based approaches for predicting protein functional
sites.- The role of Transcription Factor Binding Sites in Promoters
and Their In Silico Detection.- In silico Discovery of DNA
Regulatory Sites and Modules.-Literature Mining for Association and
Meaning: Mining the Research Literature in Systems Biology.-
GoPubMed: Exploring PubMed with Ontological Background Knowledge.-
BiblioSphere - Hypothesis Generation in Regulatory Network
Analysis.- Biological Knowledge Extraction.- Genomic Databases:
Using KEGG in the Transition from Genomics to Chemical Genomics.-
Ensembl: Open-Source Software for Large-Scale Genome Analysis.-
Management of spatially organised biological data using EMAGE.-
Equality of the sexes? Parent-of-origin effects on transcription
and de novo mutations.- Biological Networks: Methods for Structural
Inference and Functional Module Identification inIntracellular
Networks.- Methods for Dynamical Inference in Intracellular
Networks.- ASIAN: Network Inference Web Server.- Bridging the Gap:
Bioinformatics for Metabolomics.- Virtual Reality Meets Functional
Genomics.- Systems Biology of Personalized Medicine.
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