This unique textbook/reference presents unified coverage of bioinformatics topics relating to both biological sequences and biological networks, providing an in-depth analysis of cutting-edge distributed algorithms, as well as of relevant sequential algorithms. In addition to introducing the latest algorithms in this area, more than fifteen new distributed algorithms are also proposed. Topics and features: reviews a range of open challenges in biological sequences and networks; describes in detail both sequential and parallel/distributed algorithms for each problem; suggests approaches for distributed algorithms as possible extensions to sequential algorithms, when the distributed algorithms for the topic are scarce; proposes a number of new distributed algorithms in each chapter, to serve as potential starting points for further research; concludes each chapter with self-test exercises, a summary of the key points, a comparison of the algorithms described, and a literature review.

This book presents a comprehensive review of key distributed graph algorithms for computer network applications, with a particular emphasis on practical implementation. Topics and features: introduces a range of fundamental graph algorithms, covering spanning trees, graph traversal algorithms, routing algorithms, and self-stabilization; reviews graph-theoretical distributed approximation algorithms with applications in ad hoc wireless networks; describes in detail the implementation of each algorithm, with extensive use of supporting examples, and discusses their concrete network applications; examines key graph-theoretical algorithm concepts, such as dominating sets, and parameters for mobility and energy levels of nodes in wireless ad hoc networks, and provides a contemporary survey of each topic; presents a simple simulator, developed to run distributed algorithms; provides practical exercises at the end of each chapter.

Network science is a rapidly emerging field of study that encompasses mathematics, computer science, physics, and engineering. A key issue in the study of complex networks is to understand the collective behavior of the various elements of these networks. Although the results from graph theory have proven to be powerful in investigating the structures of complex networks, few books focus on the algorithmic aspects of complex network analysis. Filling this need, Complex Networks: An Algorithmic Perspective supplies the basic theoretical algorithmic and graph theoretic knowledge needed by every researcher and student of complex networks. This book is about specifying, classifying, designing, and implementing mostly sequential and also parallel and distributed algorithms that can be used to analyze the static properties of complex networks. Providing a focused scope which consists of graph theory and algorithms for complex networks, the book identifies and describes a repertoire of algorithms that may be useful for any complex network. Provides the basic background in terms of graph theory Supplies a survey of the key algorithms for the analysis of complex networks Presents case studies of complex networks that illustrate the implementation of algorithms in real-world networks, including protein interaction networks, social networks, and computer networks Requiring only a basic discrete mathematics and algorithms background, the book supplies guidance that is accessible to beginning researchers and students with little background in complex networks. To help beginners in the field, most of the algorithms are provided in ready-to-be-executed form. While not a primary textbook, the author has included pedagogical features such as learning objectives, end-of-chapter summaries, and review questions

Network science is a rapidly emerging field of study that encompasses mathematics, computer science, physics, and engineering. A key issue in the study of complex networks is to understand the collective behavior of the various elements of these networks. Although the results from graph theory have proven to be powerful in investigating the structures of complex networks, few books focus on the algorithmic aspects of complex network analysis. Filling this need, Complex Networks: An Algorithmic Perspective supplies the basic theoretical algorithmic and graph theoretic knowledge needed by every researcher and student of complex networks. This book is about specifying, classifying, designing, and implementing mostly sequential and also parallel and distributed algorithms that can be used to analyze the static properties of complex networks. Providing a focused scope which consists of graph theory and algorithms for complex networks, the book identifies and describes a repertoire of algorithms that may be useful for any complex network. Provides the basic background in terms of graph theory Supplies a survey of the key algorithms for the analysis of complex networks Presents case studies of complex networks that illustrate the implementation of algorithms in real-world networks, including protein interaction networks, social networks, and computer networks Requiring only a basic discrete mathematics and algorithms background, the book supplies guidance that is accessible to beginning researchers and students with little background in complex networks. To help beginners in the field, most of the algorithms are provided in ready-to-be-executed form. While not a primary textbook, the author has included pedagogical features such as learning objectives, end-of-chapter summaries, and review questions

This unique textbook/reference presents unified coverage of bioinformatics topics relating to both biological sequences and biological networks, providing an in-depth analysis of cutting-edge distributed algorithms, as well as of relevant sequential algorithms. In addition to introducing the latest algorithms in this area, more than fifteen new distributed algorithms are also proposed. Topics and features: reviews a range of open challenges in biological sequences and networks; describes in detail both sequential and parallel/distributed algorithms for each problem; suggests approaches for distributed algorithms as possible extensions to sequential algorithms, when the distributed algorithms for the topic are scarce; proposes a number of new distributed algorithms in each chapter, to serve as potential starting points for further research; concludes each chapter with self-test exercises, a summary of the key points, a comparison of the algorithms described, and a literature review.

This book presents a comprehensive review of key distributed graph algorithms for computer network applications, with a particular emphasis on practical implementation. Topics and features: introduces a range of fundamental graph algorithms, covering spanning trees, graph traversal algorithms, routing algorithms, and self-stabilization; reviews graph-theoretical distributed approximation algorithms with applications in ad hoc wireless networks; describes in detail the implementation of each algorithm, with extensive use of supporting examples, and discusses their concrete network applications; examines key graph-theoretical algorithm concepts, such as dominating sets, and parameters for mobility and energy levels of nodes in wireless ad hoc networks, and provides a contemporary survey of each topic; presents a simple simulator, developed to run distributed algorithms; provides practical exercises at the end of each chapter.