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This volume contains papers presented at the 20th International
Conference on Genome Informatics (GIW 2009) held at the Pacifico
Yokohama, Japan from December 14 to 16, 2009. The GIW Series
provides an international forum for the presentation and discussion
of original research papers on all aspects of bioinformatics,
computational biology and systems biology. Its scope includes
biological sequence analysis, protein structure prediction, genetic
regulatory networks, bioinformatic algorithms, comparative
genomics, and biomolecular data integration and analysis. Boasting
a history of 20 years, GIW is the longest-running international
bioinformatics conference.A total of 18 contributed papers were
selected for presentation at GIW 2009 and for inclusion in this
book. In addition, this book contains abstracts from the five
invited speakers: Sean Eddy (HHMI's Janelia Farm, USA), Minoru
Kanehisa (Kyoto University, Japan), Sang Yup Lee (KAIST, Korea),
Hideyuki Okano (Keio University, Japan) and Mark Ragan (University
of Queensland, Australia).
This book constitutes the thoroughly refereed post-conference
proceedings of the 16th International Conference on DNA Computing
and Molecular Programming, DNA16, held in Hong Kong, China, in June
2010. The 16 revised full papers presented were carefully selected
during two rounds of reviewing and improvement from 59 submissions.
The papers are well balanced between theoretical and experimental
work and address all areas that relate to biomolecular computing,
including demonstrations of biomolecular computing, theoretical
models of biomolecular computing, biomolecular algorithms,
computational processes in vitro and in vivo, analysis and
theoretical models of laboratory techniques, biotechnological and
other applications of DNA computing, DNA nanostructures, DNA
devices such as DNA motors, DNA error evaluation and correction, in
vitro evolution, molecular design, self-assembled systems, nucleic
acid chemistry, and simulation tools.
The 7th International Colloquium on Grammatical Inference (ICGI
2004) was
heldintheNationalCentreforScienti?cResearch"Demokritos,"Athens,
Greece on October 11-13, 2004. ICGI 2004 was the seventh in a
series of successful biennial international conferences in the area
of grammaticalinference. Previous meetings were held in Essex, UK;
Alicante, Spain; Montpellier, France; Ames, Iowa, USA; Lisbon,
Portugal; and Amsterdam, The Netherlands. This series of
conferences seeks to provide a forum for the presentation and
discussion of original research papers on all aspects of
grammatical inference. Grammatical inference, the study of learning
grammars from data, is an -
tablishedresearch?eldinarti?cialintelligence, datingbacktothe1960s,
andhas been extensively addressed by researchers in automata
theory, language acqui- tion, computational linguistics, machine
learning, pattern recognition, compu- tional learning theory and
neural networks. ICGI 2004 emphasized the multid- ciplinary
natureoftheresearch?eldandthe diversedomains inwhich gramm- ical
inference is being applied, such as natural language acquisition,
compu- tionalbiology, structuralpatternrecognition,
informationretrieval, Webmining, text processing, data compression
and adaptive intelligent agents. We received 45 high-quality papers
from 19 countries. The papers were - viewed by at least two - in
most cases three - reviewers. In addition to the 20 full papers, 8
short papers that received positive comments from the reviewers
were accepted, and they appear in a separate section of this
volume. The t- ics of the accepted papers vary from theoretical
results of learning algorithms to innovative applications of
grammatical inference, and from learning several interesting
classes of formal grammars to estimations of probabilistic
grammars.
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