In the application of statistics to ecological inference problems, hierarchical models combine explicit models of ecological system structure or dynamics with models of how ecological systems are observed. The principles of hierarchical modeling are appliedin this book to a wide range of problems ranging from the molecular level, through populations, ecosystems, landscapes, networks, through to the global ecosphere.

Provides an excellent introduction to modelling Collects together in one source a wide range of modelling techniquesCovers a wide range of topics, from the molecular level to the global ecosphere"

The book presents a collection of large-scale network-modeling studies on coastal systems in Latin America. It includes a novel description of the functioning of coastal complex ecosystems and also predicts how natural and human-made disturbances percolate through the networks. Coastal areas belong to the most populated ecosystems around the globe, and are massively influenced by human impacts such as shipping, mining, fisheries, tourism, pollution and human settlements. Even though many of these activities have facilitated socio-economic development, they have also caused a significant deterioration in natural populations, communities and ecosystems worldwide. Covering coastal marine ecosystems of Latin America such as the NE and SE Pacific, NW Atlantic and Caribbean areas, it discusses the construction of quantitative (Ecopath-Ecosim-Ecospace and Centrality of Node Sets) and semi-quantitative (Loop Analysis) multispecies trophic-network models to describe and assess the impacts of natural and human interventions like pelagic and benthic fishing as well as natural events such as El Nino, and La Nina. The book also features steady state (and/or near moving equilibrium) and dynamical models to support the management of exploited organisms, and applies and quantifies macroscopic indices, based on Ascendency (Ulanowicz) and Local Stability (Levins Loop Analysis). Further, it discusses the determination of the Keystone Species Complex Index, which is a holistic extension of the classical concept of Keystone Species (Paine), offering novel strategies for conservation monitoring and management.

Stochastic kinetic methods are currently considered to be the most realistic and elegant means of representing and simulating the dynamics of biochemical and biological networks. Deterministic versus stochastic modelling in biochemistry and systems biology introduces and critically reviews the deterministic and stochastic foundations of biochemical kinetics, covering applied stochastic process theory for application in the field of modelling and simulation of biological processes at the molecular scale. Following an overview of deterministic chemical kinetics and the stochastic approach to biochemical kinetics, the book goes onto discuss the specifics of stochastic simulation algorithms, modelling in systems biology and the structure of biochemical models. Later chapters cover reaction-diffusion systems, and provide an analysis of the Kinfer and BlenX software systems. The final chapter looks at simulation of ecodynamics and food web dynamics.
Introduces mathematical concepts and formalisms of deterministic and stochastic modelling through clear and simple examplesPresents recently developed discrete stochastic formalisms for modelling biological systems and processesDescribes and applies stochastic simulation algorithms to implement a stochastic formulation of biochemical and biological kinetics

The book presents a collection of large-scale network-modeling studies on coastal systems in Latin America. It includes a novel description of the functioning of coastal complex ecosystems and also predicts how natural and human-made disturbances percolate through the networks. Coastal areas belong to the most populated ecosystems around the globe, and are massively influenced by human impacts such as shipping, mining, fisheries, tourism, pollution and human settlements. Even though many of these activities have facilitated socio-economic development, they have also caused a significant deterioration in natural populations, communities and ecosystems worldwide. Covering coastal marine ecosystems of Latin America such as the NE and SE Pacific, NW Atlantic and Caribbean areas, it discusses the construction of quantitative (Ecopath-Ecosim-Ecospace and Centrality of Node Sets) and semi-quantitative (Loop Analysis) multispecies trophic-network models to describe and assess the impacts of natural and human interventions like pelagic and benthic fishing as well as natural events such as El Nino, and La Nina. The book also features steady state (and/or near moving equilibrium) and dynamical models to support the management of exploited organisms, and applies and quantifies macroscopic indices, based on Ascendency (Ulanowicz) and Local Stability (Levins Loop Analysis). Further, it discusses the determination of the Keystone Species Complex Index, which is a holistic extension of the classical concept of Keystone Species (Paine), offering novel strategies for conservation monitoring and management.