This textbook focuses on stochastic analysis in systems biology
containing both the theory and application. While the authors
provide a review of probability and random variables, subsequent
notions of biochemical reaction systems and the relevant concepts
of probability theory are introduced side by side. This leads to an
intuitive and easy-to-follow presentation of stochastic framework
for modeling subcellular biochemical systems. In particular, the
authors make an effort to show how the notion of propensity, the
chemical master equation and the stochastic simulation algorithm
arise as consequences of the Markov property.
The text contains many illustrations, examples and exercises to
illustrate the ideas and methods that are introduced. Matlab code
is also provided where appropriate. Additionally, the cell cycle is
introduced as a more complex case study.
Senior undergraduate and graduate students in mathematics and
physics as well as researchers working in the area of systems
biology, bioinformatics and related areas will find this text
useful.
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