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Phylogenetic Analysis based on SNPs and Allelic Variations (Paperback)
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Phylogenetic Analysis based on SNPs and Allelic Variations (Paperback)
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The domestic water buffalo is a major source of milk, meat,
draught, hide and employment to the small farmers in many Asian
countries especially Pakistan. The phylogeny and genetic structure
of water buffalo (Bubalus bubalis) is still not explored well in
Nili, Ravi, Nili-Ravi, Kundi and Azakheli buffalo breeds of
Pakistan. The genetic characterization of these breeds were
completed using mitochondrial D-loop region and FAO/ISAG
recommended microsatellite markers through sequencing and
genotyping respectively. A reasonable number of SNPs and Allele
variations were identified. The phylogenetic relationships among
these breeds as well as with other breeds of the world were
constructed using certain Bioinformatics softwares. This revealed
very interesting information about phylogeny, history of
domestication and origin of water buffalo in Pakistan and added
valuable to the AnGR of the region. The work provided the basic
data which is very helpful for determining the genetic diversity of
buffaloes, breed identification, forensic and paternity tests and
designing effective breeding and conservational policies in future.
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