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High-Performance Computational Solutions in Protein Bioinformatics (Paperback, 2014 ed.)
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High-Performance Computational Solutions in Protein Bioinformatics (Paperback, 2014 ed.)
Series: SpringerBriefs in Computer Science
Expected to ship within 10 - 15 working days
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Recent developments in computer science enable algorithms
previously perceived as too time-consuming to now be efficiently
used for applications in bioinformatics and life sciences. This
work focuses on proteins and their structures, protein structure
similarity searching at main representation levels and various
techniques that can be used to accelerate similarity searches.
Divided into four parts, the first part provides a formal model of
3D protein structures for functional genomics, comparative
bioinformatics and molecular modeling. The second part focuses on
the use of multithreading for efficient approximate searching on
protein secondary structures. The third and fourth parts
concentrate on finding 3D protein structure similarities with the
support of GPUs and cloud computing. Parts three and four both
describe the acceleration of different methods. The text will be of
interest to researchers and software developers working in the
field of structural bioinformatics and biomedical databases.
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