This book aims to be an introduction to haplotype information for both the wet and dry labs. Chapters detail co-barcoding and linked-reads based methods, third generation sequencing based methods, Hi-C based methods, single-cell and Strand-seq, and methods for using haplotype data once obtained. Written in the successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Haplotyping: Methods and Protocols aims to provide comprehensive and accessible methods to undergraduate, graduate, and established scientists.

Originally published in 1982, The Masterpiece of Nature examines sex as representative of the most important challenge to the modern theory of evolution. The book suggests that sex evolved, not as the result of normal Darwinian processes of natural selection, but through competition between populations or species - a hypothesis elsewhere almost universally discredited. The book also discusses the nature of sex and its consequences for the individual and for the population, as well as various other theories of sex. Since the value of these theories is held to reside wholly in their ability to predict the patterns of sexuality observed in nature, the book seeks to provide an extensive review of the circumstances in which sexuality is attenuated or lost throughout the animal kingdom, and these facts are then used to weigh up the merits of the rival theories. This book will be of interest to researchers in the area of genetics, ecology and evolutionary biology.

The field of genetics has changed considerably since the first edition of Genetics for Cat Breeders was published in 1971. For decades the discussion of genetics was limited to observations of populations but now geneticists are beginning to look at the actual molecular mechanisms behind the traits and diseases seen in the cat. Continuing the pioneering work of the late Roy Robinson, Carolyn Vella and her team of experts have significantly expanded the scope of previous editions to produce a work which is now of equal benefit to both veterinary surgeons and cat breeders. Their aim has been to make the book more accessible and understandable whilst providing an impartial look at sometimes controversial and complex issues. The book retains the most important information published in previous editions and also incorporates some of the continuing work done by Roy Robinson prior to his death. A considerable amount of new information has been added in order to provide both breeders and veterinarians with the broadest possible range of information. The authors have not only reviewed the traditional sources of scientific literature and recently published studies, but have also conducted interviews with veterinarians, researchers and breeders. * The 4th edition of Roy Robinson's established text on cat genetics has been updated by a team of specialists to reflect a decade of changes and advances in genetic research * The authorship now includes a practising veterinarian as well as experienced cat breeders, thus making this new edition useful at both veterinary and breeder levels * New technical and historical appendices contain important reference material and a glossary has been added for ease of reference

This book represents the first comprehensive compilation of deliberations on botany; genetic resources; genetic diversity analysis; classical genetics & traditional breeding; in vitro culture & genetic transformation; detailed information on molecular maps & mapping of economic genes and QTLs; whole genome sequencing of the nuclear genome and sequencing of chloroplast genome; and elucidation of functional genomics. It also addresses alternate flowering, a unique problem in mango, and discusses currently available genomic resources and databases. Gathering contributions by globally reputed experts, the book will benefit the students, teachers, and scientists in academia and at private companies interested in horticulture, genetics, breeding, pathology, entomology, physiology, molecular genetics and breeding, in vitro culture & genetic engineering, and structural and functional genomics.

This book offers a unique balance between a basic introductory knowledge of bioinformatics and a detailed study of algorithmic techniques. Bioinformatics and RNA: A Practice-Based Approach is a complete guide on the fundamental concepts, applications, algorithms, protocols, new trends, challenges, and research results in the area of bioinformatics and RNA. The book offers a broad introduction to the explosively growing new discipline of bioinformatics. It covers theoretical topics along with computational algorithms. It explores RNA bioinformatics, which contribute to therapeutics and drug discovery. Implementation of algorithms in a DotNet Framework with code and complete insight on the state-of-the-art and recent advancements are presented in detail. The book targets both novice readers as well as practitioners in the field. FEATURES Offers a broad introduction to the explosively growing new discipline of bioinformatics Covers theoretical topics and computational algorithms Explores RNA bioinformatics to unleash the potential from therapeutics to drug discovery Discusses implementation of algorithms in DotNet Frameworks with code Presents insights into the state of the art and recent advancements in bioinformatics The book is useful to undergraduate students with engineering, science, mathematics, or biology backgrounds. Researchers will be equally interested.

Rice has been chosen as a model cereal for functional genomics because of its well understood genetics. In addition, there is great similarities among all the cereals and grasses: any understanding of rice genes is directly applicable to the genes of other cereals. This book details rice functional genomics. It takes a multi-pronged genome-wide approach using structural similarities, expression profiles, and mutant phenotypes. Coverage includes the current status of genome sequencing and annotation, various tools, and resources being developed worldwide.

Cash crops are grown and sold for monetary gain and not necessarily for sustenance. They include coffee, tea, coconut, cotton, jute, groundnut, castor, linseed, cocoa, rubber, cassava, soybean, sweet potato, potato, wheat, corn and teff. While some of these crops have been improved for realizing yield potential, breeding of many of them is still in infancy. Crops that underwent rigorous breeding have eventually lost much of the diversity due to extensive cultivation with a few improved varieties and the diversity in less bred species is to be conserved. Over the past years, scholars and policy makers have become increasingly aware of the short and long-run impact of climatic factors on economic, food security, social and political outcomes . Genetic diversity, natural and induced, is much needed for the future generations to sustain food production with more climate resilient crops. In contrast, crop uniformity produced across the farm fields in the form of improved varieties is genetically vulnerable to biotic and abiotic stresses. Thus, it is essential and challenging to address the issue of compromising between maximizing crop yield under a given set of conditions and minimizing the risk of crop failure when conditions change. Cash crops are grown in an array of climatic conditions. Many of the world's poor still live in rural areas. Many are subsistence farmers, operating very small farms using very little agricultural inputs for achieving marketable outputs. Conserving the diversity of these crops and addressing all issues of crop culture through modern tools of biotechnology and genomics is a real challenge. We believe the focus of this book is to fill an unmet need of this and other grower communities by providing the necessary knowledge, albeit indirectly via the academics, to manage the risks of cash crops breeding through managing genetic diversity.

This book covers the many ways humans benefit from interactions with other living species. By studying animals of all kinds and sizes, from microbial organisms to elephants and whales, we can learn about their adaptations to extreme conditions on the planet Earth, about the evolutionary development of specialized capabilities, and about their ways to defend themselves against predators and diseases. The authors discuss the strengths and weaknesses of Homo sapiens, and how the study of animals can make us stronger and healthier. To deepen our knowledge of genetics, molecular and cell biology, physiology and medicine, we need to study model organisms. To cure human disease, we can learn from animals how they have evolved ways to protect themselves. To improve human performance, we can study the animal kingdom's top performers and learn from their successes. Considering these important pointers, the authors review genetic engineering techniques that can translate our existing and future animal connections into benefits for human health and performance. Finally, they discuss the challenges associated with our animal connection: the history of pandemics caused by bacterial and viral pathogens demonstrates that there is a risk for transmission of diseases that can disrupt human societies. The recent COVID-19 outbreak is covered in detail as an example.

First published in 1960, this book discusses the ethical implications of the view of man's nature and his place in the biological world. C. H. Waddington highlights issues of the time, such as social upheavals related to social mobility, and the changing nature of philosophical thinking in relation to the nature of good. The author argues that man differs from all other animals in his ability for social teaching and learning and that this provides him with a second method of evolutionary advance, in addition to biology. He advances this through the idea that man has the capacity to entertain ethical ideas, which is an essential and necessary feature of this new mode of evolution. From here he draws the conclusion that a consideration of the broad trends of evolution provides a framework within which we can rationally discuss the relative merits of the various systems of ethical belief current in the world. In presenting his argument, Waddington draws on research in biology, psychology, the social sciences, and philosophy. He concludes with a short consideration of some of the most important ethical problems facing mankind at the time of the book's publication.

The cause of cancer and its many manifestations is at present unknown. Since many of its manifestations, including is control of cell division, appear to represent abnormal patterns of gene expression, studies of the regulation of gene expression nwill provide important insights in the understanding and treatment of cancer. This volume attempts to present some of the recent work on regulation of gene expression in eukaryotic cells.

The field of forensic DNA analysis has grown immensely in the past two decades and genotyping of biological samples is now routinely performed in human identification (HID) laboratories. Application areas include paternity testing, forensic casework, family lineage studies, identification of human remains, and DNA databasing. Forensic DNA Analysis: Current Practices and Emerging Technologies explores the fundamental principles and the application of technologies for each aspect of forensic DNA analysis. The book begins by discussing the value of DNA evidence and how to properly recognize, document, collect, and store it. The remaining chapters examine: The most widely adopted methods and the best practices for DNA isolation from forensic biological samples and human remains Studies carried out on the use of both messenger RNA and small (micro) RNA profiling Real-time polymerase chain reaction (PCR) methods for quantification and assessment of human DNA prior to genotyping Capillary electrophoresis (CE) as a tool for forensic DNA analysis Next-generation short tandem repeat (STR) genotyping kits for forensic applications, the biological nature of STR loci, and Y-chromosome STRs (Y-STRs) Mitochondrial DNA (mtDNA) sequence analysis Single nucleotide polymorphisms (SNPs) and insertion/deletion polymorphisms (indels) in typing highly degraded DNA Deep-sequencing technologies The current state of integrated systems in forensic DNA analysis The book concludes by discussing various aspects of sample-processing training and the entities that provide such training programs. This volume is an essential resource for students, researchers, teaching faculties, and other professionals interested in human identification/forensic DNA analysis.

Originally published in 1933 Functional Affinities of Man, Monkeys and Apes gives a taxonomic and phylogenetic survey and the findings of diverse experimental investigations of lemurs, monkeys, and apes. The book discusses the inter-relationships of different Primates and emphasizes seldom-used approaches to the question of primate phylogeny. The book attempts to show how little they have been systematically tried, and argues for a regard to the proper place of functional investigations in the study of the classification and evolution of Primates. This book will be of interest to anthropologists, scientists and historians alike.

Originally published in 1987, Human Evolution looks at theories of the evolution of human behaviour (contemporary at the time of publication). The book reviews competing theories of psychological and social evolution and provides a detailed historical introduction to the subject. A key theoretical concern which emerges in the book includes the psychological significance of the human evolution issue itself. The period of human evolution covered ranges from the demise of the Miocene hominoids, to the emergence of 'civilization'. Topics covered include: functions of 'origin myths', history of the study of human evolution, methods and data-bases, theories of the nature of 'hominisation', origins of bipedalism, language and tool-use, theories of social evolution, theories of cave art and the spread of Homo sapiens to America and Australia.

A Probabilistic Model of the Genotype/Phenotype Relationship provides a new hypothesis on the relationship between genotype and phenotype. The main idea of the book is that this relationship is probabilistic, in other words, the genotype does not fully explain the phenotype. This idea is developed and discussed using the current knowledge on complex genetic diseases, phenotypic plasticity, canalization and others.

* Focuses on human identification using traditional DNA typing methods targeting short tandem repeats (STRs) * Applies the technology and usage to law enforcement investigations and identity and ancestry single nucleotide polymorphisms (SNPs) for investigational leads, mass disaster, and ancestry cases * Introduces the underlying principles of NGS, focusing forensic application and the introduction of NGS into forensic labs in the coming years

This volume looks at the framework in which different scientific disciplines are integrated into the latest studies in behavioral neurogenetics, and covers new approaches toward understanding the system that controls behavior across the animal kingdom. Chapters in this book cover topics such as mapping brain-wide mesoscale connectome from single animals with BRICseq; gut microbes and Drosophila behavior; bioassaying the function of pheromones in Drosophila melanogaster's social behavior; automated behavior analysis using a YOLO-based object detection system; and proteomic analysis of C. elegans neurons using TurboID-based proximity labeling. In the Neuromethods series style, chapters include the kind of detail and key advice from the specialists needed to get successful results in your laboratory. Cutting-edge and practical, Behavioral Neurogenetics is a valuable resource for experienced and novice researchers interested in learning more about this field and its future developments.

For millennia humanity has simultaneously deplored and waged war. With each conflict the stakes have risen, and we now face global annihilation for the sake of a practice all the world claims to condemn. Is there some seemingly irresistible force that impels us toward our own destruction? To explain this central paradox of human behaviour, Genetic Seeds of Warfare, originally published in 1989, advances a startling new theory. It traces the origins of warfare back to early groups of Homo sapiens in competition for scarce resources, showing that warfare evolved as these groups evolved: kin-group against kin-group; tribe against tribe; nation against nation. Rather than being tied to a specific gene, warfare emerged as one of many behavioural strategies for maximising genetic survival. As social groups became more complex, motivations for warfare developed from simple protection of blood relations to political appeals to shared ethnicity, religion, and national identity. But the ultimate cause of warfare is rooted in the most basic of human drives: the need to ensure that one's genes will survive and reproduce. The authors challenge many assumptions about human behaviour in general, and warfare in particular. They convincingly present the case for an evolutionary understanding of the propensity for warfare, supporting their argument with data from a vast array of social and natural science research. In doing so, they reveal why previous attempts at ending war have failed, and make proactive suggestions toward the development of a new agenda for world peace.

The oil palm is a remarkable crop, producing around 40% of the world's vegetable oil from around 6% of the land devoted to oil crops. Conventional breeding has clearly been the major focus of genetic improvement in this crop. A mix of improved agronomy and management, coupled with breeding selection have quadrupled the oil yield of the crop since breeding began in earnest in the 1920s. However, as for all perennial crops with long breeding cycles, oil palm faces immense challenges in the coming years with increased pressure from population growth, climate change and the need to develop environmentally sustainable oil palm plantations. In Oil Palm: Breeding, Genetics and Genomics, world leading organizations and individuals who have been at the forefront of developments in this crop, provide their insights and experiences of oil palm research, while examining the different challenges that face the future of the oil palm. The editors have all been involved in research and breeding of oil palm for many years and use their knowledge of the crop and their disciplinary expertise to provide context and to introduce the different research topics covered.

Interpreting Complex Forensic DNA Evidence is a handy guide to recent advances-and emerging issues-in interpreting complex DNA evidence and profiles for use in criminal investigations. In certain cases, DNA cannot be connected to a specific biological material such as blood, semen or saliva. How or when the DNA was deposited may be an issue. The possibility of generating DNA profiles from touched objects, where there may not be a visible deposit, has expanded the scope and number of exhibits submitted for DNA analysis. With such advances, and increasing improvements in technological capabilities in testing samples, this means it is possible to detect ever smaller amounts of DNA. There are also many efforts underway to seek was to interpret DNA profiles that are sub-optimal-either relative to the amount required by the testing kit and, potentially, the quality of the obtained sample. Laboratories often use enhancements in order to obtain a readable DNA profile. The broad-reaching implications of improving DNA sensitivity have led to this next, emerging generation of more complex profiles. Examples partial profiles that do not faithfully reflect the proposed donor, or mixtures of partial DNA from multiple people. A complexity threshold has been proposed to limit interpretation of poor-quality data. Research is now addressing the interpretation of transfer of trace amounts of DNA. Complex issues are arising in trial that need to be reconciled as such complexity has added challenges to the interpretation of evidence and its introduction or dismissal in certain cases in the courts. Key Features: Addresses DNA transfer, from person-to-person as well as to objects Outlines each stage required to produce a DNA profile from an exhibit-including collection, handling, storage, and analysis Discusses ethics, subjectivity, and bias-including cognitive dissonance-as they relate specifically to complex DNA evidence Highlights current techniques and the latest advances in DNA analysis, including advances in familial DNA searches Interpreting Complex Forensic DNA Evidence provides tools to assist the criminal investigator, forensic expert, and legal professional when posed with a DNA result in a forensic report or testimony. The result-and any associated statistic-may not reveal any ambiguity, complexity, or the assumptions involved in deriving it. Questions from resolved criminal cases are posed, and the relevant forensic literature, provided for the reader to assess a DNA result and any associated statistic. Case studies throughout illustrate concepts and emphasize the need for conclusions in the forensic report that are supported by the data.

The imbalance between rapidly proliferating tumor cells and inadequate and inefficient tumor vasculature leads to a decrease in oxygen levels (hypoxia and/or anoxia) in tumor tissues. Intra-tumor hypoxia profoundly affects the biological behavior of cancer cells, which become resistant to conventional therapies and acquire a more invasive and metastatic phenotype.Hypoxia is a hallmark of the malignant phenotype and a key feature of the tumor microenvironment. Hypoxia Inducible Factor 1 (HIF-1) is a master regulator of the transcriptional response to oxygen deprivation.HIF triggers the expression of genes whose products induce angiogenesis, decrease oxygen consumption, switch metabolism to glycolysis, maintain a stem cell phenotype and select for more invasive and metastatic cells. Therapeutic approaches targeting HIF, directly or downstream mediators of its transcriptional activity, are being developed. Intra-tumor hypoxia is atopic hasbeen gaining scientific interestover the last few years for its wide involvement in many physiological and pathological processes.
This volume will cover the latest research and translational aspects associated with intra-tumor hypoxia, along with opportunities for drug development offered by this unique feature of the tumor microenvironment. The ongoing efforts to translate our understanding of the biology underlying intra-tumor hypoxia in viable therapeutic options face many challenges, but this book will provide an opportunity for an in-depth analysis of the fundamental mechanisms implicated in the adaption to low oxygen levels and will scrutinize the potential for opportunities that are being pursued in both research and the drug development industry."

Originally published in 1960, The Future of Man is a chronicle of Professor Medwar's Reith lectures of 1959. The book outlines his predictions about the future estate of man, with the 'process of foretelling, rather than with what is actually foretold'. He asks, can we predict the future size of populations? What is the evidence and theoretical background for the belief that human intelligence is declining? Could human beings become uniformly excellent or is inborn diversity and inequality a necessary part of the texture of human populations? The lectures tried to answer these questions and attempts to end with a definition of the biological standing of man. This book will be of interest to anthropologists, biologists and natural historians.

Originally published in 1972, Homo Sapiens examines how humans emerged from among the millions of other species and achieved our unique position within the animal kingdom. The book examines what direction future evolution will take and what may be regarded as the 'meaning' of human existence. It stipulates that these are the questions for which no real basis of discussion existed before the 20th century, and at the time of publication, some were still without a definite answer. The book sets out analyse these questions and the continuing debate that has arisen from their study. This is an account of the uniqueness of man in the animal kingdom, how this uniqueness arose during evolution, and what traces of it can be detected in animals other than man. The book describes the mental and physical evolution of man, from his earliest ancestors to the present day. He also gives an account of man's cultural development seeking to establish that there is an underlying principal of cultural evolution, a principle that has been denied by many historians. Later chapters deal with the future and with possible forecasts of mankind's further physical, intellectual and cultural evolution.

Jac A. Nickoloff and Merl F. Hoekstra update and expand their two earlier acclaimed volumes (Vol. I: DNA Repair in Prokaryotes and Lower Eukaryotes and Vol. II: DNA Repair in Higher Eurkaryotes) with cutting-edge reviews by leading authorities of primary experimental findings about DNA repair processes in cancer biology. The reviews cover a wide range of topics from viruses and prokaryotes to higher eukaryotes, and include several new topics, among them the role of recombination in replication of damaged DNA, X-ray crystallographic analysis of DNA repair protein structures, DNA repair proteins and teleomere function, and the roles of BRCA1 and BRCA2 in DNA repair. Authoritative and up-to-date, DNA Damage and Repair, Vol. III: Advances from Phage to Humans surveys the rapidly moving research in DNA damage and repair, and explains the important functional relationships among different DNA repair pathways and the relationship between DNA repair pathways, cancer etiology, and cancer therapies.

This is a reference handbook for young researchers exploring gene and cell therapy. Gene therapy could be defined as a set of strategies modifying gene expression or correcting mutant/defective genes through the administration of DNA (or RNA) to cells, in order to treat disease. Important advances like the discovery of RNA interference, the completion of the Human Genome project or the development of induced pluripotent stem cells (iPSc) and the basics of gene therapy are covered. This is a great book for students, teachers, biomedical researchers delving into gene/cell therapy or researchers borrowing skills from this scientific field.

Plants exhibit forms of asymmetry analogous to "handedness" in bilaterally symmetrical animals. This book explores the evolutionary significance and development of asymmetry. Examples of genetic control include the direction of tendril or stem coiling of many climbing plants; the so-called spiral phyllotaxy and floral taxy; and contorted petal arrangement is another kind of left- right symmetry in plants; the direction of contortion is fixed in some but not in other plants. The book will underscore tha all phenomena related to handedness start during embryogenesis itself, with the occurrence of embryo rotation. Key selling features: First consolidated book on Plant Handedness Relates handedness, asymmetry and chirality to the evolution of different organizational levels in plant biology Emphasizes handedness as a vital governing force in plant functional evolution Provides a new perspective, hitherto ignored, into plant developemtn and evolution Describes how an age-old phenomenon can give scope for investigation from a very modern interdisciplinary approach