This book helps the reader make use of the mathematical models of biological phenomena starting from the basics of programming and computer simulation. Computer simulations based on a mathematical model enable us to find a novel biological mechanism and predict an unknown biological phenomenon. Mathematical biology could further expand the progress of modern life sciences. Although many biologists are interested in mathematical biology, they do not have experience in mathematics and computer science. An educational course that combines biology, mathematics, and computer science is very rare to date. Published books for mathematical biology usually explain the theories of established mathematical models, but they do not provide a practical explanation for how to solve the differential equations included in the models, or to establish such a model that fits with a phenomenon of interest. MATLAB is an ideal programming platform for the beginners of computer science. This book starts from the very basics about how to write a programming code for MATLAB (or Octave), explains how to solve ordinary and partial differential equations, and how to apply mathematical models to various biological phenomena such as diabetes, infectious diseases, and heartbeats. Some of them are original models, newly developed for this book. Because MATLAB codes are embedded and explained throughout the book, it will be easy to catch up with the text. In the final chapter, the book focuses on the mathematical model of the proneural wave, a phenomenon that guarantees the sequential differentiation of neurons in the brain. This model was published as a paper from the author's lab (Sato et al., PNAS 113, E5153, 2016), and was intensively explained in the book chapter "Notch Signaling in Embryology and Cancer", published by Springer in 2020. This book provides the reader who has a biological background with invaluable opportunities to learn and practice mathematical biology.

This is the first workbook that introduces the multilevel approach to modeling with categorical outcomes using IBM SPSS Version 20. Readers learn how to develop, estimate, and interpret multilevel models with categorical outcomes. The authors walk readers through data management, diagnostic tools, model conceptualization, and model specification issues related to single-level and multilevel models with categorical outcomes. Screen shots clearly demonstrate techniques and navigation of the program. Modeling syntax is provided in the appendix. Examples of various types of categorical outcomes demonstrate how to set up each model and interpret the output. Extended examples illustrate the logic of model development, interpretation of output, the context of the research questions, and the steps around which the analyses are structured. Readers can replicate examples in each chapter by using the corresponding data and syntax files available at www.psypress.com/9781848729568.

The book opens with a review of multilevel with categorical outcomes, followed by a chapter on IBM SPSS data management techniques to facilitate working with multilevel and longitudinal data sets. Chapters 3 and 4 detail the basics of the single-level and multilevel generalized linear model for various types of categorical outcomes. These chapters review underlying concepts to assist with trouble-shooting common programming and modeling problems. Next population-average and unit-specific longitudinal models for investigating individual or organizational developmental processes are developed. Chapter 6 focuses on single- and multilevel models using multinomial and ordinal data followed by a chapter on models for count data. The book concludes with additional trouble shooting techniques and tips for expanding on the modeling techniques introduced.

Ideal as a supplement for graduate level courses and/or professional workshops on multilevel, longitudinal, latent variable modeling, multivariate statistics, and/or advanced quantitative techniques taught in psychology, business, education, health, and sociology, this practical workbook also appeals to researchers in these fields. An excellent follow up to the authors' highly successful Multilevel and Longitudinal Modeling with IBM SPSS and Introduction to Multilevel Modeling Techniques, 2nd Edition, this book can also be used with any multilevel and/or longitudinal book or as a stand-alone text introducing multilevel modeling with categorical outcomes.

R for College Mathematics and Statistics encourages the use of R in mathematics and statistics courses. Instructors are no longer limited to ``nice'' functions in calculus classes. They can require reports and homework with graphs. They can do simulations and experiments. R can be useful for student projects, for creating graphics for teaching, as well as for scholarly work. This book presents ways R, which is freely available, can enhance the teaching of mathematics and statistics. R has the potential to help students learn mathematics due to the need for precision, understanding of symbols and functions, and the logical nature of code. Moreover, the text provides students the opportunity for experimenting with concepts in any mathematics course. Features: Does not require previous experience with R Promotes the use of R in typical mathematics and statistics course work Organized by mathematics topics Utilizes an example-based approach Chapters are largely independent of each other

While theoretical statistics relies primarily on mathematics and hypothetical situations, statistical practice is a translation of a question formulated by a researcher into a series of variables linked by a statistical tool. As with written material, there are almost always differences between the meaning of the original text and translated text. Additionally, many versions can be suggested, each with their advantages and disadvantages. Analysis of Questionnaire Data with R translates certain classic research questions into statistical formulations. As indicated in the title, the syntax of these statistical formulations is based on the well-known R language, chosen for its popularity, simplicity, and power of its structure. Although syntax is vital, understanding the semantics is the real challenge of any good translation. In this book, the semantics of theoretical-to-practical translation emerges progressively from examples and experience, and occasionally from mathematical considerations. Sometimes the interpretation of a result is not clear, and there is no statistical tool really suited to the question at hand. Sometimes data sets contain errors, inconsistencies between answers, or missing data. More often, available statistical tools are not formally appropriate for the given situation, making it difficult to assess to what extent this slight inadequacy affects the interpretation of results. Analysis of Questionnaire Data with R tackles these and other common challenges in the practice of statistics.

The R Companion to Elementary Applied Statistics includes traditional applications covered in elementary statistics courses as well as some additional methods that address questions that might arise during or after the application of commonly used methods. Beginning with basic tasks and computations with R, readers are then guided through ways to bring data into R, manipulate the data as needed, perform common statistical computations and elementary exploratory data analysis tasks, prepare customized graphics, and take advantage of R for a wide range of methods that find use in many elementary applications of statistics. Features: Requires no familiarity with R or programming to begin using this book. Can be used as a resource for a project-based elementary applied statistics course, or for researchers and professionals who wish to delve more deeply into R. Contains an extensive array of examples that illustrate ideas on various ways to use pre-packaged routines, as well as on developing individualized code. Presents quite a few methods that may be considered non-traditional, or advanced. Includes accompanying carefully documented script files that contain code for all examples presented, and more. R is a powerful and free product that is gaining popularity across the scientific community in both the professional and academic arenas. Statistical methods discussed in this book are used to introduce the fundamentals of using R functions and provide ideas for developing further skills in writing R code. These ideas are illustrated through an extensive collection of examples. About the Author: Christopher Hay-Jahans received his Doctor of Arts in mathematics from Idaho State University in 1999. After spending three years at University of South Dakota, he moved to Juneau, Alaska, in 2002 where he has taught a wide range of undergraduate courses at University of Alaska Southeast.

Praise for the first edition: "One of my biggest complaints when I teach introductory statistics classes is that it takes me most of the semester to get to the good stuff-inferential statistics. The author manages to do this very quickly....if one were looking for a book that efficiently covers basic statistical methodology and also introduces statistical software [this text] fits the bill." -The American Statistician Applied Statistical Inference with MINITAB, Second Edition distinguishes itself from other introductory statistics textbooks by focusing on the applications of statistics without compromising mathematical rigor. It presents the material in a seamless step-by-step approach so that readers are first introduced to a topic, given the details of the underlying mathematical foundations along with a detailed description of how to interpret the findings, and are shown how to use the statistical software program Minitab to perform the same analysis. Gives readers a solid foundation in how to apply many different statistical methods. MINITAB is fully integrated throughout the text. Includes fully worked out examples so students can easily follow the calculations. Presents many new topics such as one- and two-sample variances, one- and two-sample Poisson rates, and more nonparametric statistics. Features mostly new exercises as well as the addition of Best Practices sections that describe some common pitfalls and provide some practical advice on statistical inference. This book is written to be user-friendly for students and practitioners who are not experts in statistics, but who want to gain a solid understanding of basic statistical inference. This book is oriented towards the practical use of statistics. The examples, discussions, and exercises are based on data and scenarios that are common to students in their everyday lives.

This open access book contains review papers authored by thirteen plenary invited speakers to the 9th International Congress on Industrial and Applied Mathematics (Valencia, July 15-19, 2019). Written by top-level scientists recognized worldwide, the scientific contributions cover a wide range of cutting-edge topics of industrial and applied mathematics: mathematical modeling, industrial and environmental mathematics, mathematical biology and medicine, reduced-order modeling and cryptography. The book also includes an introductory chapter summarizing the main features of the congress. This is the first volume of a thematic series dedicated to research results presented at ICIAM 2019-Valencia Congress.

Analyzing Baseball Data with R Second Edition introduces R to sabermetricians, baseball enthusiasts, and students interested in exploring the richness of baseball data. It equips you with the necessary skills and software tools to perform all the analysis steps, from importing the data to transforming them into an appropriate format to visualizing the data via graphs to performing a statistical analysis. The authors first present an overview of publicly available baseball datasets and a gentle introduction to the type of data structures and exploratory and data management capabilities of R. They also cover the ggplot2 graphics functions and employ a tidyverse-friendly workflow throughout. Much of the book illustrates the use of R through popular sabermetrics topics, including the Pythagorean formula, runs expectancy, catcher framing, career trajectories, simulation of games and seasons, patterns of streaky behavior of players, and launch angles and exit velocities. All the datasets and R code used in the text are available online. New to the second edition are a systematic adoption of the tidyverse and incorporation of Statcast player tracking data (made available by Baseball Savant). All code from the first edition has been revised according to the principles of the tidyverse. Tidyverse packages, including dplyr, ggplot2, tidyr, purrr, and broom are emphasized throughout the book. Two entirely new chapters are made possible by the availability of Statcast data: one explores the notion of catcher framing ability, and the other uses launch angle and exit velocity to estimate the probability of a home run. Through the book's various examples, you will learn about modern sabermetrics and how to conduct your own baseball analyses. Max Marchi is a Baseball Analytics Analyst for the Cleveland Indians. He was a regular contributor to The Hardball Times and Baseball Prospectus websites and previously consulted for other MLB clubs. Jim Albert is a Distinguished University Professor of statistics at Bowling Green State University. He has authored or coauthored several books including Curve Ball and Visualizing Baseball and was the editor of the Journal of Quantitative Analysis of Sports. Ben Baumer is an assistant professor of statistical & data sciences at Smith College. Previously a statistical analyst for the New York Mets, he is a co-author of The Sabermetric Revolution and Modern Data Science with R.

Linear Algebra: An Introduction With Mathematica uses a matrix-based presentation and covers the standard topics any mathematician will need to understand linear algebra while using Mathematica. Development of analytical and computational skills is emphasized, and worked examples provide step-by-step methods for solving basic problems using Mathematica. The subject's rich pertinence to problem solving across disciplines is illustrated with applications in engineering, the natural sciences, computer animation, and statistics.

Agile may be the best-kept management secret on the planet and if you want a quickstart introduction, then Agile NOW is essential reading. Agile is a different way of thinking that’s steeped in common sense and produces immediate results. That’s why there’s a quiet revolution going on.

Agile will help you design better products, get faster results, cut down costs, and keep improving as you go. With a simple system called The Golden Triangle - Prioritising, Time Boxing and Change Management - you can hit the ground running and get started immediately.

Agile NOW is slim, accessible and easy to dip into - yet covers all the essential theory and provides practical advice. Agile is for everyone - from one-person start-ups to multinationals – the promise of quicker, cheaper, better has universal appeal. Agile NOW shows you how to get going fast at minimal cost.

Learn how to program by diving into the R language, and then use your newfound skills to solve practical data science problems. With this book, you'll learn how to load data, assemble and disassemble data objects, navigate R's environment system, write your own functions, and use all of R's programming tools. RStudio Master Instructor Garrett Grolemund not only teaches you how to program, but also shows you how to get more from R than just visualizing and modeling data. You'll gain valuable programming skills and support your work as a data scientist at the same time. Work hands-on with three practical data analysis projects based on casino games Store, retrieve, and change data values in your computer's memory Write programs and simulations that outperform those written by typical R users Use R programming tools such as if else statements, for loops, and S3 classes Learn how to write lightning-fast vectorized R code Take advantage of R's package system and debugging tools Practice and apply R programming concepts as you learn them

Statistical Programming in SAS Second Edition provides a foundation for programming to implement statistical solutions using SAS, a system that has been used to solve data analytic problems for more than 40 years. The author includes motivating examples to inspire readers to generate programming solutions. Upper-level undergraduates, beginning graduate students, and professionals involved in generating programming solutions for data-analytic problems will benefit from this book. The ideal background for a reader is some background in regression modeling and introductory experience with computer programming. The coverage of statistical programming in the second edition includes Getting data into the SAS system, engineering new features, and formatting variables Writing readable and well-documented code Structuring, implementing, and debugging programs that are well documented Creating solutions to novel problems Combining data sources, extracting parts of data sets, and reshaping data sets as needed for other analyses Generating general solutions using macros Customizing output Producing insight-inspiring data visualizations Parsing, processing, and analyzing text Programming solutions using matrices and connecting to R Processing text Programming with matrices Connecting SAS with R Covering topics that are part of both base and certification exams.

Handbook of HydroInformatics Volume III: Water Data Management Best Practices presents the latest and most updated data processing techniques that are fundamental to Water Science and Engineering disciplines. These include a wide range of the new methods that are used in hydro-modeling such as Atmospheric Teleconnection Pattern, CONUS-Scale Hydrologic Modeling, Copula Function, Decision Support System, Downscaling Methods, Dynamic System Modeling, Economic Impacts and Models, Geostatistics and Geospatial Frameworks, Hydrologic Similarity Indices, Hydropower/Renewable Energy Models, Sediment Transport Dynamics Advanced Models, Social Data Mining, and Wavelet Transforms. This volume is an example of true interdisciplinary work. The audience includes postgraduates and above interested in Water Science, Geotechnical Engineering, Soil Science, Civil Engineering, Chemical Engineering, Computer Engineering, Engineering, Applied Science, Earth and Geoscience, Atmospheric Science, Geography, Environment Science, Natural Resources, Mathematical Science, and Social Sciences. It is a fully comprehensive handbook which provides all the information needed related to the best practices for managing water data.

Clinical Data Quality Checks for CDISC Compliance using SAS is the first book focused on identifying and correcting data quality and CDISC compliance issues with real-world innovative SAS programming techniques such as Proc SQL, metadata and macro programming. Learn to master Proc SQL's subqueries and summary functions for multi-tasking process. Drawing on his more than 25 years' experience in the pharmaceutical industry, the author provides a unique approach that empowers SAS programmers to take control of data quality and CDISC compliance. This book helps you create a system of SDTM and ADaM checks that can be tracked for continuous improvement. How often have you encountered issues such as missing required variables, duplicate records, invalid derived variables and invalid sequence of two dates? With the SAS programming techniques introduced in this book, you can start to monitor these and more complex data and CDISC compliance issues. With increased standardization in SDTM and ADaM specifications and data values, codelist dictionaries can be created for better organization, planning and maintenance. This book includes a SAS program to create excel files containing unique values from all SDTM and ADaM variables as columns. In addition, another SAS program compares SDTM and ADaM codelist dictionaries with codelists from define.xml specifications. Having tools to automate this process greatly saves time from doing it manually. Features SDTMs and ADaMs Vitals SDTMs and ADaMs Data CDISC Specifications Compliance CDISC Data Compliance Protocol Compliance Codelist Dictionary Compliance

Age-Period-Cohort analysis has a wide range of applications, from chronic disease incidence and mortality data in public health and epidemiology, to many social events (birth, death, marriage, etc) in social sciences and demography, and most recently investment, healthcare and pension contribution in economics and finance. Although APC analysis has been studied for the past 40 years and a lot of methods have been developed, the identification problem has been a major hurdle in analyzing APC data, where the regression model has multiple estimators, leading to indetermination of parameters and temporal trends. A Practical Guide to Age-Period Cohort Analysis: The Identification Problem and Beyond provides practitioners a guide to using APC models as well as offers graduate students and researchers an overview of the current methods for APC analysis while clarifying the confusion of the identification problem by explaining why some methods address the problem well while others do not. Features * Gives a comprehensive and in-depth review of models and methods in APC analysis. * Provides an in-depth explanation of the identification problem and statistical approaches to addressing the problem and clarifying the confusion. * Utilizes real data sets to illustrate different data issues that have not been addressed in the literature, including unequal intervals in age and period groups, etc. Contains step-by-step modeling instruction and R programs to demonstrate how to conduct APC analysis and how to conduct prediction for the future Reflects the most recent development in APC modeling and analysis including the intrinsic estimator Wenjiang Fu is a professor of statistics at the University of Houston. Professor Fu's research interests include modeling big data, applied statistics research in health and human genome studies, and analysis of complex economic and social science data.

Python Programming and Numerical Methods: A Guide for Engineers and Scientists introduces programming tools and numerical methods to engineering and science students, with the goal of helping the students to develop good computational problem-solving techniques through the use of numerical methods and the Python programming language. Part One introduces fundamental programming concepts, using simple examples to put new concepts quickly into practice. Part Two covers the fundamentals of algorithms and numerical analysis at a level that allows students to quickly apply results in practical settings.

An Up-to-Date, All-in-One Resource for Using SAS and R to Perform Frequent TasksThe first edition of this popular guide provided a path between SAS and R using an easy-to-understand, dictionary-like approach. Retaining the same accessible format, SAS and R: Data Management, Statistical Analysis, and Graphics, Second Edition explains how to easily perform an analytical task in both SAS and R, without having to navigate through the extensive, idiosyncratic, and sometimes unwieldy software documentation. The book covers many common tasks, such as data management, descriptive summaries, inferential procedures, regression analysis, and graphics, along with more complex applications. New to the Second EditionThis edition now covers RStudio, a powerful and easy-to-use interface for R. It incorporates a number of additional topics, including using application program interfaces (APIs), accessing data through database management systems, using reproducible analysis tools, and statistical analysis with Markov chain Monte Carlo (MCMC) methods and finite mixture models. It also includes extended examples of simulations and many new examples. Enables Easy Mobility between the Two SystemsThrough the extensive indexing and cross-referencing, users can directly find and implement the material they need. SAS users can look up tasks in the SAS index and then find the associated R code while R users can benefit from the R index in a similar manner. Numerous example analyses demonstrate the code in action and facilitate further exploration. The datasets and code are available for download on the book's website.

Management and Engineering of Critical Infrastructures focuses on two important aspects of CIS, management and engineering. The book provides an ontological foundation for the models and methods needed to design a set of systems, networks and assets that are essential for a society's functioning, and for ensuring the security, safety and economy of a nation. Various examples in agriculture, the water supply, public health, transportation, security services, electricity generation, telecommunication, and financial services can be used to substantiate dangers. Disruptions of CIS can have serious cascading consequences that would stop society from functioning properly and result in loss of life. Malicious software (a.k.a., malware), for example, can disrupt the distribution of electricity across a region, which in turn can lead to the forced shutdown of communication, health and financial sectors. Subsequently, proper engineering and management are important to anticipate possible risks and threats and provide resilient CIS. Although the problem of CIS has been broadly acknowledged and discussed, to date, no unifying theory nor systematic design methods, techniques and tools exist for such CIS.

IBM SPSS for Introductory Statistics is designed to help students learn how to analyze and interpret research. In easy-to-understand language, the authors show readers how to choose the appropriate statistic based on the design, and to interpret outputs appropriately. There is such a wide variety of options and statistics in SPSS, that knowing which ones to use and how to interpret the outputs can be difficult. This book assists students with these challenges. Comprehensive and user-friendly, the book prepares readers for each step in the research process: design, entering and checking data, testing assumptions, assessing reliability and validity, computing descriptive and inferential parametric and nonparametric statistics, and writing about results. Dialog windows and SPSS syntax, along with the output, are provided. Several realistic data sets, available online, are used to solve the chapter problems. This new edition includes updated screenshots and instructions for IBM SPSS 25, as well as updated pedagogy, such as callout boxes for each chapter indicating crucial elements of APA style and referencing outputs. IBM SPSS for Introductory Statistics is an invaluable supplemental (or lab text) book for students. In addition, this book and its companion, IBM SPSS for Intermediate Statistics, are useful as guides/reminders to faculty and professionals regarding the specific steps to take to use SPSS and/or how to use and interpret parts of SPSS with which they are unfamiliar.

All disciplines of science and engineering use numerical methods for complex problem analysis, due to the highly mathematical nature of the field. Analytical methods alone are unable to solve many complex problems engineering students and professionals confront. Introduction to MATLAB (R) Programming for Engineers and Scientists examines the basic elements of code writing, and describes MATLAB (R) methods for solving common engineering problems and applications across the range of engineering disciplines. The text uses a class-tested learning approach and accessible two-color page design to guide students from basic programming to the skills needed for future coursework and engineering practice.

Newcomers to R are often intimidated by the command-line interface, the vast number of functions and packages, or the processes of importing data and performing a simple statistical analysis. The R Primer provides a collection of concise examples and solutions to R problems frequently encountered by new users of this statistical software. This new edition adds coverage of R Studio and reproducible research.

Bayes Factors for Forensic Decision Analyses with R provides a self-contained introduction to computational Bayesian statistics using R. With its primary focus on Bayes factors supported by data sets, this book features an operational perspective, practical relevance, and applicability-keeping theoretical and philosophical justifications limited. It offers a balanced approach to three naturally interrelated topics: Probabilistic Inference - Relies on the core concept of Bayesian inferential statistics, to help practicing forensic scientists in the logical and balanced evaluation of the weight of evidence. Decision Making - Features how Bayes factors are interpreted in practical applications to help address questions of decision analysis involving the use of forensic science in the law. Operational Relevance - Combines inference and decision, backed up with practical examples and complete sample code in R, including sensitivity analyses and discussion on how to interpret results in context. Over the past decades, probabilistic methods have established a firm position as a reference approach for the management of uncertainty in virtually all areas of science, including forensic science, with Bayes' theorem providing the fundamental logical tenet for assessing how new information-scientific evidence-ought to be weighed. Central to this approach is the Bayes factor, which clarifies the evidential meaning of new information, by providing a measure of the change in the odds in favor of a proposition of interest, when going from the prior to the posterior distribution. Bayes factors should guide the scientist's thinking about the value of scientific evidence and form the basis of logical and balanced reporting practices, thus representing essential foundations for rational decision making under uncertainty. This book would be relevant to students, practitioners, and applied statisticians interested in inference and decision analyses in the critical field of forensic science. It could be used to support practical courses on Bayesian statistics and decision theory at both undergraduate and graduate levels, and will be of equal interest to forensic scientists and practitioners of Bayesian statistics for driving their evaluations and the use of R for their purposes. This book is Open Access.

Computational Finance presents a modern computational approach to mathematical finance within the Windows environment, and contains financial algorithms, mathematical proofs and computer code in C/C++. The author illustrates how numeric components can be developed which allow financial routines to be easily called by the complete range of Windows applications, such as Excel, Borland Delphi, Visual Basic and Visual C++.
These components permit software developers to call mathematical finance functions more easily than in corresponding packages. Although these packages may offer the advantage of interactive interfaces, it is not easy or computationally efficient to call them programmatically as a component of a larger system. The components are therefore well suited to software developers who want to include finance routines into a new application.
Typical readers are expected to have a knowledge of calculus, differential equations, statistics, Microsoft Excel, Visual Basic, C++ and HTML.
A CD-ROM is included which contains: working computer code, demonstration applications and also pdf versions of several research articles.
* Enables reader to incorporate advanced financial modelling techniques in Windows compatible software
* Aids the development of bespoke software solutions covering GARCH volatility modelling, derivative pricing with Partial Differential Equations, VAR, bond and stock options
* Includes CD-ROM with adaptive software