In the context of increasing international concern for food and environmental quality, use of Plant Growth-Promoting Rhizobacteria (PGPR) for reducing chemical inputs in agriculture is a potentially important issue. PGPR are root-colonizing bacteria that exert beneficial effects on plant growth and development, but they can be also employed in the control of plant pathogens, for enhancing the efficiency of fertilizers, and for degrading xenobiotic compounds. This book provides an update by renowned international experts on the most recent advances in the ecology of these important bacteria, the application of innovative methodologies for their study, their interaction with the host plant, and their potential application in agriculture.

The field of bacterial diagnostics has seen unprecedented advances in recent years. The increased need for accurate detection and identification of bacteria in human, animal, food, and environmental samples has fueled the development of new techniques. The field has seen extensive research aided by the information from bacterial genome sequencing projects. Although traditional methods of bacterial detection and identification remain in use in laboratories around the world, there is now a growing trend toward the use of nucleic ac- based diagnostics and alternative biochemically and immunologically based formats. The ultimate goal of all diagnostic tests is the accurate detection, identification, or typing of microorganisms in samples of interest. Although the resulting information is of obvious use in the areas of patient management, animal health, and quality control, it is also of use in monitoring routes of infection and outlining strategies for infection control. There is, therefore, a need to ensure that the information being provided is of the highest standard and that any new technique is capable of delivering this.

Entomopathogenic bacteria (Bacillus thuringiensis and B. sphaericus) are increasingly used as biopesticides to control larval insect populations which are either agricultural or forestry pests and to reduce those which as adults are vectors of severe human diseases. This new book, the first since 1993 to address all aspects of entomopathogenic bacteria, provides undergraduate and graduate students as well as research scientists with a complete, modern view of this important group of bacteria. The authors, chosen for their sustained contributions to the field, cover both fundamental and applied research in this area. The main topics include bacterial ecology and taxonomy, toxin diversity, activity and mode of action, regulation and environment of the genes, safety and ecotoxicology, production and field application of the bacteria, and outbreaks of resistant populations. The book concludes with the most recent data obtained on transgenic biotechnology and addresses environmental impact issues.

The discipline of microbiology that deals with an amazingly diverse group of simple organisms, such as viruses, archaea, bacteria, algae, fungi, and protozoa, is an exciting field of Science. Starting as a purely descriptive field, it has transformed into a truly experimental and interdisciplinary science inspiring a number of investigators to generate th a wealth of information on the entire gamut of microbiology. The later part of 20 century has been a golden era with molecular information coming in to unravel interesting insights ofthe microbial world. Ever since they were brought to light through a pair of ground glasses by the Dutchman, Antony van Leeuwenhoek, in later half of 17th century, they have been studied most extensively throughout the next three centuries, and are still revealing new facets of life and its functions. The interest in them, therefore, continues even in the 21 st century. Though they are simple, they provide a wealth of information on cell biology, physiology, biochemistry, ecology, and genetics and biotechnology. They, thus, constitute a model system to study a whole variety of subjects. All this provided the necessary impetus to write several valuable books on the subject of microbiology. While teaching a course of Microbial Genetics for the last 35 years at Delhi University, we strongly felt the need for authentic compiled data that could give exhaustive background information on each of the member groups that constitute the microbial world.

Over the course of the past decade, there have been remarkable advances in the study of human pathogenic fungi. These developments have taken place throughout a wide range of disciplines, and have come as the result of newly available genome sequences of pathogens such as candida albicans and other model fungi. In Candida Albicans: Methods and Protocols, expert researchers explore these exciting new insights, focusing on the study of medically important fungi and Candida spp in particular. Chapters examine critical aspects of molecular methods, providing information on reporter gene assays, transformation, gene expression in vivo, and methods for large-scale gene disruption. At the same time, the work includes in-depth descriptions of disease models of candidiasis, facts about strain identification, and guidelines on the preparation of samples for proteomic investigations and tandem affinity purification. Composed in the highly successful "Methods in Molecular Biology " series format, each chapter contains a brief introduction, step-by-step methods, a list of necessary materials, and a Notes section which shares tips on troubleshooting and avoiding known pitfalls.

Authoritative and cutting edge, Candida Albicans: Methods and Protocols is an invaluable source of methods for investigators in the exhilarating fields of medical and molecular mycology."

"Alginates: Biology and Applications" provides an overview of the state of art of alginate material properties, genetics and the molecular mechanisms underlying alginate biosynthesis as well as applications of tailor-made alginates in medicine, food and biotechnology.

Topics treated are: material properties of alginates, alginate production: precursor biosynthesis, polymerization and secretion, bacterial system for alginate uptake and degradation, enzymatic alginate modification, alginate gene regulation, role of alginate in bacterial biofilms, microbial production of alginates: physiology and process aspects, alginate-based blends and nano/microbeads, applications of alginates in food, alginate and its comonomer mannuronic acid: medical relevance as drugs.

Did You Just Eat That? provides the answers to perennial questions about food and germs, such as whether electric hand dryers spread fewer germs than paper towels or about picking a crisp off the ground within five seconds of dropping it. The authors show how they have determined everything from how much bacteria gets transferred from sharing utensils to how many microbes live on restaurant menus. They list their materials and methods, guide the reader through their results and offer explanations of food safety and microbiology. Written with humour, this fascinating book reveals surprising answers to the weirdest and most commonly debated questions about food and germs.

A lethal germ is unleashed in the U.S. mail. A chain of letters spreads terror from Florida to Washington, D.C., from New York to Connecticut, from the halls of Congress to the assembly lines of the U.S. Postal Service. Five people die, and ten thousand more line up for antibiotics to protect against exposure. The government, already outsmarted by the terrorist hijackers of 9/11, leaves its workers vulnerable and a diabolical killer on the loose.

Based on hundreds of hours of interviews and a review of thousands of pages of government documents, "The Killer Strain is the definitive account of the year in which bioterrorism became a reality in the United States. Revealing the little-known victims and unsung heroes in the anthrax debacle, investigative reporter Marilyn Thompson also examines the FBI's slow-paced investigation of the crimes and the unprecedented scientific challenges posed by the case.

"The Killer Strain, more than just a thrilling read, is also a clarion wake-up call. It shows how billions of dollars and a decade of elaborate bioterror dress rehearsals meant nothing in the face of a real attack -- and how we may still be at risk.

This manual reflects practical approaches to handling bacteria in the labora- tory. It is designed to recall historical methods of bacterial genetics that have had recent developments and to present new techniques that allow full genome analysis. It has been written for microbiologists who need to group their protocols at the state of the art of a new millennium and also for scientists in other fields of life sciences who need to use bacteria for their research. Teachers, graduate students, and postdocs also will benefit from having these protocols to help them understand modern bacterial genetics. I learned so much from these contributions from my colleagues that I have no doubt about the daily usefulness of this book. April 2002 Michel Blot XII Abbreviations Acyl-HSL N-acyl homoserine lactone moi multiplicity of infection Amp or Ap ampicillin N amino C carboxy NMR nuclear magnetic resonance CIO-HSL N-decanoyl-L-homoserine lactone 3-0H-C14:1-HSL N-(3-hydroxy-7 -cis-tetra- C12-HSL N-dodecanoyl-L-homoserine lac- decanoyl)homo-serine lactone tone 3-0H-C4-HSL N-3-hydroxybutanoyl-L- C14-HSL N-tetradecanoyl-L-homoserine homoserine lactone lactone ONPG o-nitrophenyl ~-D-galactopyranoside C4-HSL N-butanoyl-L-homoserine lactone ORF open reading frame C6-HSL N-hexanoyl-L-homoserine lactone OTG I-S-octyl-~-D-thioglucoside C8-HSL N-octanoyl-L-homoserine lactone 3-oxo-CIO-HSL N-3-oxodecanoyl-L-homo- Cam or Cm chloramphenicol serine lactone CBD chitin binding domain 3-oxo-C12-HSL N-3-oxododecanoyl-L- CHEF contour clamped homogenous electric homoserine lactone field 3-oxo-C14-HSL N-3-oxotetradecanoyl-L- CI consistency index homoserine lactone CRIM conditional-replication, integration, 3-oxo-C4-HSL N-3-oxobutanoyl-L-homoser- and modular ine lactone dCTP deoxycytidine triphosphate 3-oxo-C6-HSL N-3 -oxohexanoyl-L-homoser- deg.

This is the first book on bacterial systematics at the undergraduate level. The first part explains why bacteria are classified and how they are named. It also covers the practice of classification, including evolutionary studies and identification. The applications of these methods are illustrated in the second part of the book, which describes progress in the classification and identification of the spirochaetes, helical and curved bacteria, Gram-negative aerobic, facultative and strictly anaerobic bacteria, Gram-positive cocci, rods and endospore formers, mycoplasmas, and actinomycetes, and outlines the importance of these organisms.The first book on this topic at undergraduate levelIncludes evolutionary studies and the ArchaeaCovers theory and practice of bacterial classification and identificationUser-friendly style and profuse illustrations

Cyanobacteria make a major contribution to world photosynthesis and nitrogen fixation, but are also notorious for causing nuisances such as dense and often toxic blooms' in lakes and the ocean. The Ecology of Cyanobacteria: Their Diversity in Time and Space is the first book to focus solely on ecological aspects of these organisms. Its twenty-two chapters are written by some thirty authors, who are leading experts in their particular subject. The book begins with an overview of the cyanobacteria - or blue-green algae, for those who are not specialists - then looks at their diversity in the geological record and goes on to describe their ecology in present environments where they play important roles. Why is one of the key groups of organisms in the Precambrian still one of the most important groups of phototrophs today? The importance of ecological information for rational management and exploitation of these organisms for commercial and other practical purposes is also assessed. Accounts are provided of nuisances as well as the ecology of the commercially successful Spirulina and the role of cyanobacteria in ecosystem recovery from oil pollution. Many chapters include aspects of physiology, biochemistry, geochemistry and molecular biology where these help general understanding of the subject. In addition there are three chapters dealing specifically with molecular ecology. Thirty-two pages of colour photos incorporate about seventy views and light micrographs. These features make the book valuable to a wide readership, including biologists, microbiologists, geologists, water managers and environmental consultants. The book complements the highly successful The Molecular Biology of Cyanobacteria already published by Kluwer.

Creating bacteria with modified genetic properties allows the specific investigation of these microorganisms. Electrotransformation is a highly efficient and easy to apply technique to introduce genetic material into bacterial cells. A strong electric field is used for this purpose.
In the present manual, protocols for the transformation of about 40 strains of bacteria are described. Emphasis is placed on the individual critical procedural steps, since the practical details mainly depend on the bacterial strain under investigation. This presentation together with the theoretical introductionary chapters, allows the user to modify and adapt each protocol to his/her own experiments. Bacterial strains with relevance in the food industry, biotechnology, medical and veterinary fields, agroindustry and environmental sciences are covered.

Detailed information dealing with the ecology of mycobacteria is derived from a variety of different scientific fields such as botany, biochemistry, genetics, immunology, microbiology and epidemiology. This is the first attempt to evaluate this information from an ecological point of view and to develop a strategy for the prevention of tuberculosis and other mycobacterioses based on the ecological behavior of mycobacteria, especially the potentially pathogenic species capable of either growth in the environment or provoking disease. Regarding the interests of the developing countries, special attention is paid to the ecology of Mycobacterium leprae and to the supporting effect of accompanying mycobacteria in its pathogenicity. On a more positive side, environmental mycobacteria play an important role in the ecology of moorland dragonflies. Such a book is needed for specialists working in the field of mycobacterial research, clinical laboratories, the public health service, food hygiene, the water industry and in general ecology.

This book contains the Proceedings of the Ninth International Symposium on Pho- totrophic Prokaryotes (IXth ISPP) which was held in Vienna, Austria, from September 6-12,1997. In 1973, the far-sighted efforts of Gerhart Drews, Roger Y. Stanier, and Nor- bert Pfennig launched the first ISPP as a joint forum for scientific discussion of all aspects of research on phototrophic prokaryotes, both anoxygenic and oxygenic (cyanobacteria or blue-green algae). The ISPP International Scientific Committee, a rather loose community of scientists (see page vii for a list of current members), has since been responsible for the organization of the ISPPs on a triennial basis, without any dedicated financial support from a society, membership fees, or similar. The success of the ISPPs is therefore due to the continued enthusiasm of the scientific community for such a forum, as exemplified by the rise in attendance from 79 (1 st ISPP) to more than 400 active scientists (plus depen- dants) from all five continents in Vienna. Comparing the Book of Abstracts of 1973 with that of 1997 reflects the tremendous change that has occurred in the last 25 years in scien- tific research on phototrophic prokaryotes. Two noteworthy examples of such change are the significant shift in emphasis from anoxyphototrophs to cyanobacteria and the advent of molecular genetics, culminating at the 9th ISPP in the first complete genomic DNA se- quence of a phototrophic prokaryote, viz. the cyanobacterium Synechocystis sp. PCC6803.

Since the discovery of circadian rhythms in cyanobacteria in the late 1980s, the field has exploded with new information. The cyanobacterial model system for studying circadian rhythms, "Synechococcus elongatus," has allowed a detailed genetic dissection of the bacterial clock due to the methods currently available in molecular, structural, and evolutionary biology.

This book addresses multiple aspects of bacterial circadian programs: the history and background of the cyanobacteria and circadian rhythms in microorganisms, the molecular basis, structure, and evolution of the circadian clock, entrainment of the oscillator with the environment and the control of downstream processes by the clock, the demonstration of adaptive significance and the prokaryotic clock s remarkable stability, and mathematical and synthetic oscillator models for clock function.

Experts in the field provide a timely and comprehensive review and a stepping-stone for future work on this amazing group of microorganisms and timing."

Bacterial plasmids originating in a wide range of genera are being studied from a variety of perspectives in hundreds of laboratories around the globe. These elements are well known for carrying "special" genes that confer important survival properties, frequently neces sary under atypical conditions. Classic examples of plasmid-borne genes are those provid ing bacterial resistance to toxic substances such as antibiotics, metal ions, and bacte riophage. Often included are those determining bacteriocins, which may give the bacterium an advantage in a highly competitive environment. Genes offering metabolic alternatives to the cell under nutritionally stressed conditions are also commonly found on plasmids, as are determinants important to colonization and pathogenesis. It is likely that in many, if not most, cases plasmids and their passenger determinants represent DNA acquired recently by their bacterial hosts, and it is the characteristic mobility of these elements that enables their efficient establishment in new bacterial cells by the process known as conjugation. Whereas many plasmids are fully capable of promoting their own conjugal transfer, others move only with help from coresident elements. The ability of a plasmid to establish itself in a variety of different species is com mon, and recent studies have shown that transfer can in some cases occur from bacterial cells to eukaryotes such as yeast."

Published nearly ten years ago, the first edition of Practical Atlas for Bacterial Identification broke new ground with the wealth of detail and breadth of information it provided. The second edition is poised to do the same. Differing fundamentally from the first edition, this book begins by introducing the concept of bacteria community intelligence as reflected in corrosion, plugging, and shifts in the quality parameters in the product whether it be water, gas, oil, or even air. It presents a new classification system for bacterial communities based upon their effect and activities, and not their composition. The book represents a radical departure from the classical reductionist identification of bacteria dominated by genetic and biochemical analyses of separated strains. The author takes a holistic approach based on form, function, and habitat of communities (consorms) of bacteria in real environments. He uses factors related to the oxidation-reduction potential at the site where the consorm is active and the viscosity of the bound water within that consorm to position their community structures within a two-dimensional bacteriological positioning system (BPS) that then allows the functional role to be defined. This book has an overarching ability to define bacterial activities as consorms in a very effective and applied manner useful to an applied audience involved in bacterial challenges. Organized for ease of use, the book allows readers to start with the symptom, uncover the bacterial activities, and then indentify the communities distinctly enough to allow management and control practices that minimize the damage. The broad spectrum approach, new to this edition, lumps compatible bacteria together into a relatively harmonious consortia that share a common primary purpose. It gives a big picture view of the role of bacteria not as single strains but collectively as communities and uses this information to provide key answe

A special meeting of the Royal Society in London in 1986 marked the centenary of the first demonstration of nitrogen fixation. Currently the subject is of great practical importance because the use of nitrogenous fertilizers has resulted in unacceptable levels of water pollution; also these fertilizers are becoming steadily less economic both in cash terms and in utilization of fossil fuels for their manufacture. The number of papers published and the frequency of national and international meetings to discuss research into nitrogen fixation have both increased steadily during the 1970s and 1980s. Specialist monographs and review papers are often too detailed to be of real use to undergraduates in biology or related areas such as agriculture and forestry, and even for graduates and research workers newly entering the field of nitrogen fixation. For people in these categories, the senior author wrote The Biology of Nitrogen-fixing Organisms published by McGraw Hill in 1979. This book has similar aims. It incorporates new findings that have not only resolved some of the uncertainties reported in that earlier text hut, more importantly, it reflects the influence on the subject of recent developments in biochemistry, molecular biology, genetic engineering and other biotechnologies. We have devoted more attention to quantitative aspects of the subject, but unfortunately the many practical difficulties for accurate field assessment of nitrogen fixation and its contribution to nitrogen cycles means that many assessments are either in contlict with each other or must be accepted as tentative.

Rhizosphere biology is approaching a century of investigations wherein growth-promoting rhizomicroorganisms (PGPR) have attracted special attention for their ability to enhance productivity, profitability and sustainability at a time when food security and rural livelihood are a key priority. Bio-inputs - either directly in the form of microbes or their by-products - are gaining tremendous momentum and harnessing the potential of agriculturally important microorganisms could help in providing low-cost and environmentally safe technologies to farmers.One approach to such biologically-based strategies is the use of naturally occurring products such as PGPR. Advances in PGPR Research explores recent developments and global issues in biopesticide research, presented via extended case studies and up-to-date coverage of: * Low input biofertilizers and biofungicides used for sustainable agriculture. * Molecular techniques to enhance efficacy of microbial inputs. * Intellectual property issues in PGPR research. Written by an international team of experts, this book considers new concepts and global issues in biopesticide research and evaluates the implications for sustainable productivity. It is an invaluable resource for researchers in applied agricultural biotechnology, microbiology and soil science, and also for industry personnel in these areas.

Lactic acid bacteria (LAB) have historically been used as starter cultures for the production of fermented foods, especially dairy products. Over recent years, new areas have had a strong impact on LAB studies: the application of omics tools; the study of complex microbial ecosystems, the discovery of new LAB species, and the use of LAB as powerhouses in the food and medical industries. This second edition of Biotechnology of Lactic Acid Bacteria: Novel Applications addresses the major advances in the fields over the last five years. Thoroughly revised and updated, the book includes new chapters. Among them: * The current status of LAB systematics; * The role of LAB in the human intestinal microbiome and the intestinal tract of animals and its impact on the health and disease state of the host; * The involvement of LAB in fruit and vegetable fermentations; * The production of nutraceuticals and aroma compounds by LAB; and * The formation of biofilms by LAB. This book is an essential reference for established researchers and scientists, clinical and advanced students, university professors and instructors, nutritionists and food technologists working on food microbiology, physiology and biotechnology of lactic acid bacteria.

During the mid-forties bacteria and phages were dis- covered to be suitable objects for the study of genet- ics. Genetic phenomena such as mutation and recombina- tion, which had already been known in eukaryotes for a long time, were now shown to exist in bacteria and phages as well. New phenomena as lysogeny and trans- duction were discovered, which gained great importance beyond the field of microbial genetics. Bacteria and phages are of small size, multiply rapid- ly, and have chemically defined growth requirements. Many selective procedures can be applied to screen for rarely occurring mutants or recombinants. Therefore, they offered ideal conditions to investigate genetic processes and to interpret them in molecular terms. Many new methods were developed (e. g. CsCl density gradient centrifugation) and old techniques were im- proved and modified for new purposes (e. g. chemical mutagenesis). Hypotheses, such as the semiconservative replication of DNA, mutation by transition and trans- version and operon regulation, have had an extraordi- narily stimulating effect on the research in general genetics. Thus, in the past two decades, from the ge- netics of microbes (including fungi) the field of mo- lecular genetics developed. Many text books compete in presenting the latest knowledge on this subject. But to date there are only a few laboratory manuals which introduce the student of biology to the manifold ex- perimental techniques of microbial and molecular gene- tics. This laboratory manual is an attempt to redress the balance.

Life on earth began with bacteria, which now colonize every corner of the planet. As the ancestors of mitochondria, bacteria are also fundamental for our cells. Most bacteria look alike, but have very different functions. Therefore, knowing the functional profile of bacteria helps understand their impact on our life. This book provides a wealth of information on the functional evolution of bacteria in a novel and coherent way. The book is aimed towards scientists as well as those who are curious about the world of bacteria and their relationships with mitochondria, the powerhouses of our cells, and us.

Published nearly ten years ago, the first edition of Practical Atlas for Bacterial Identification broke new ground with the wealth of detail and breadth of information it provided. The second edition is poised to do the same. Differing fundamentally from the first edition, this book begins by introducing the concept of bacteria community intelligence as reflected in corrosion, plugging, and shifts in the quality parameters in the product whether it be water, gas, oil, or even air. It presents a new classification system for bacterial communities based upon their effect and activities, and not their composition.

The book represents a radical departure from the classical reductionist identification of bacteria dominated by genetic and biochemical analyses of separated strains. The author takes a holistic approach based on form, function, and habitat of communities (consorms) of bacteria in real environments. He uses factors related to the oxidation-reduction potential at the site where the consorm is active and the viscosity of the bound water within that consorm to position their community structures within a two-dimensional bacteriological positioning system (BPS) that then allows the functional role to be defined. This book has an overarching ability to define bacterial activities as consorms in a very effective and applied manner useful to an applied audience involved in bacterial challenges.

Organized for ease of use, the book allows readers to start with the symptom, uncover the bacterial activities, and then indentify the communities distinctly enough to allow management and control practices that minimize the damage. The broad spectrum approach, new to this edition, lumps compatible bacteria together into a relatively harmonious consortia that share a common primary purpose. It gives a big picture view of the role of bacteria not as single strains but collectively as communities and uses this information to provide key answers to common bacterial problems.