Microbial plant pathogens causing qualitative and quantitative losses in all corps are present not only in the infected plants, but also in the environmental comprising of soil, water and air. The vectors present in the environment spread the microbial pathogens to short and/or long distances. Detection of microbial pathogens rapidly and reliably by employing suitable sensitive applicable for different ecosystems. The pathogens have to be identified precisely and differentiated and quantified to plan appropriate short- and long-term strategies to contain the incidence and spread of diseases induced by them. This book aims to present all relevant and latest information on the detection techniques based on the biological, biochemical, immunological and nucleic acid characteristics of microbial pathogens presents in the host plants, as well as in the natural substrates that support the survival and perpetuation of the pathogens.

This book provides comprehensive information on the latest tools and techniques of molecular genetics and their applications in crop improvement. It thoroughly discusses advanced techniques used in molecular markers, QTL mapping, marker-assisted breeding, and molecular cytogenetics.

The need for the development of techniques based on the characteristics of the viral proteins and genomic nucleic acids was realized in order to detect, identify, differentiate and quantify viruses in the infected plants/planting materials with or without symptoms of infection. Immunoassays have been successfully applied for the detection of viruses in crop and weed host plant species as well as in the vectors. Nucleic acid-based techniques have been demonstrated to be the most reliable and sensitive tests for detection, identification and differentiation of viruses and viroids present in plants and planting materials.. Inclusion of numerous protocols in appropriate chapters as appendix is a unique feature of this volume.

Grassland produces feed for livestock, improves soil fertility and structure, protects water resources and may contribute to climate change mitigation through carbon storage and to biodiversity preservation. It simultaneously maintains sustainable economic outputs for farmers and provides ecosystem services. Turf similarly c- siderably contributes to our environment by adding beauty to our surroundings, providing a safe playing surface for sports and recreation. The species diversity present in most grasslands and turfs is a functional div- sity contributing to the previously mentioned agronomic and environmental bene?ts. The species belong to different functional groups and the adequate species com- sition may maximise the agronomic performance through a higher production and a better quality and the environmental bene?ts through symbiotic nitrogen ?xation or sources of pollen and nectar to pollinators. In a given grassland or turf, the genetic diversity available in each variety contributes to this economic and environmental performance, but also to the stability of these performances including the stability of the resistance against pathogens and pests. Natural grasslands share many species with the sown swards. They may be regarded as favourable sites for in situ preservation of genetic diversity as well as valuable sources of diversity for breeding.

The future of agriculture strongly depends on our ability to enhance productivity without sacrificing long-term production potential. An ecologically and economically sustainable strategy is the application of microorganisms, such as the diverse bacterial species of plant growth promoting bacteria (PGPB). The use of these bio-resources for the enhancement of crop productivity is gaining worldwide importance. Bacteria in Agrobiology: Crop Ecosystems describes the beneficial role of plant growth promoting bacteria with special emphasis on oil yielding crops, cereals, fruits and vegetables. Chapters present studies on various aspects of bacteria-plant interactions, soil-borne and seed-borne diseases associated with food crops such as rice, sesame, peanuts, and horticultural crops. Further reviews describe technologies to produce inoculants, the biocontrol of post harvest pathogens as a suitable alternative to agrochemicals, and the restoration of degraded soils.

Morphological, biological, biochemical and physiological characteristics have been used for the detection, identification and differentiation of fungal pathogens up to species level. Tests based on biological characteristics are less consistent. Immunoassays have been shown to be effective in detecting fungal pathogens present in plants and environmental samples. Development of monoclonal antibody technology has greatly enhanced the sensitivity and specificity of detection, identification and differentiation of fungal species and varieties/strains. Nucleic acid-based techniques involving hybridization with or amplification of unique DNA have provided results rapidly and reliably. Presentation of a large number of protocols is a unique feature of this volume.

Development of transgenic crop plants, their utilization for improved agriculture, health, ecology and environment and their socio-political impacts are currently important fields in education, research and industries and also of interest to policy makers, social activists and regulatory and funding agencies. This work prepared with a class-room approach on this multidisciplinary subject will fill an existing gap and meet the requirements of such a broad section of readers. Volume 2 with 13 chapters contributed by 41 eminent scientists from nine countries deliberates on the utilization of transgenic crops for resistance to herbicides, biotic stress and abiotic stress, manipulation of developmental traits, production of biofuel, biopharmaceuticals and algal bioproducts, amelioration of ecology and environment and fostering functional genomics as well as on regulations and steps for commercialization, patent and IPR issues, and compliance to concerns and compulsions of utilizing transgenic plants.

The entire range of the developmental processes in plants is regulated by a shift in the hormonal concentration, tissue sensitivity and their interaction with the factors operating around them. Out of the recognized hormones, attention has largely been focused on five - Auxins, Gibberellins, Cytokinin, Abscisic acid and Ethylene. However, the information about the most recent group of phytohormone (Brassinosteroids) has been incorporated in this book. This volume includes a selection of newly written, integrated, illustrated reviews describing our knowledge of Brassinosteroids and aims to describe them at the present time. Various chapters incorporate both theoretical and practical aspects and may serve as baseline information for future researches through which significant developments are possible. This book will be useful to the students, teachers and researchers, both in universities and research institutes, especially in relation to biological and agricultural sciences.

From the 4th - 8th of September 2011, the Eucarpia Fodder Crops and Amenity Grasses Section, held its 29th Meeting in the surroundings of Dublin Castle in Ireland. The theme of the meeting was 'Breeding strategies for sustainable forage and turf grass improvement'. Grasslands cover a significant proportion of the land mass of the world, and play a pivotal role in global food production. At the same time we are faced with several challenges that affect the way in which we think about this valuable set of resources. The population of the world is expected to exceed 9 billion by 2050, and increase of about one third relative to today's levels. This population increase will be focused in urban areas, and in what are currently viewed as "developing" countries, meaning that the buying power of this increased population will be greater - shifting the balance of demand from staple crops to high value items such as meat and dairy products. Overall that the world will have to approximately double agricultural output across all categories of food to meet the demands of this larger, urbanised population. This is occurring against a backdrop of equally large challenges in terms of global climate change. Agriculture is already a significant contributor to e.g. greenhouse gas emissions, deforestation and soil erosion. The situation is made more complex by an increased emphasis on biofuels as a solution for our imminent oil shortage, resulting in increased competition between land utilised for food and fuel. In short, agriculture must continue to feed the world, whilst not contributing to damaging it further. It must be sustainable. Plant breeding plays a significant but frequently understated role in meeting the challenges presented by this complex and changing scenario. However, plant breeding and improvement is itself undergoing radical change driven by technology. This book explores how forage and turf breeding is changing and adapting to meet these challenges using the technological advances being experienced in plant breeding as a whole.

The rapid population growth and the increase in the per capita income, especially in the group of emerging countries referred to as BRIC countries (Brazil, Russia, India, China and South Africa) has created huge pressure for the expansion of the agricultural growing area and the crop yields to meet the rising demand. As a result, many areas that have been considered marginal for growing crops, due to their low fertility, drought, salinity, and many other abiotic stresses, have now been incorporated in the production system. Additionally, climate change has brought new challenges to agriculture to produce food, feed, fiber and biofuels. To cope with these new challenges, many plant breeding programs have reoriented their breeding scope to stress tolerance in the last years. The authors of this book have collected the most recent advances and discoveries applied to breeding for abiotic stresses in this book, starting with new physiological concepts and breeding methods, and moving on to discuss modern molecular biological approaches geared to the development of improved cultivars tolerant to most sorts of abiotic stress. Written in an easy to understand style, this book is an excellent reference work for students, scientists and farmers interested in learning how to breed for abiotic stresses scenarios, presenting the state-of-the-art in plant stresses and allowing the reader to develop a greater understanding of the basic mechanisms of tolerance to abiotic stresses and how to breed for them.

The Saccharinae clade of the Poaceae (grass) family of flowering plants includes several important crops with a rich history of contributions to humanity and the promise of still-greater contributions, as a result of some of the highest biomass productivity levels known, resilience to drought and other environmental challenges that are likely to increase, amenability to production systems that may mitigate or even reverse losses of ecological capital such as topsoil erosion, and the recent blossoming of sorghum as a botanical and genomic model for the clade. In Genomics of the Saccharinae, advances of the past decade and earlier are summarized and synthesized to elucidate the current state of knowledge of the structure, function, and evolution of the Sorghum, Saccharum, and Miscanthus genera, and progress in the application of this knowledge to crop improvement. As a backdrop, it is important to understand the naturally occurring diversity in each genus, its organization and distribution, and its evolutionary history. Genomic tools and methods for Saccharinae biology and improvement have improved dramatically in the past few years - a detailed summary of these tools and their applications is a central element of this book. Application of genomic tools to priorities in crop improvement, including understanding and manipulating plant growth and development, composition, and defense, as well as increasing the quality and productivity of seed/grain, sugar, biomass, and other value-added products under a range of conditions and inputs, are addressed. In particular, as the first native African crop to emerge as a genomic model, sorghum offers an excellent case study of challenges and opportunities in linking new advances in biosciences to solving some of Africa's major agricultural problems. Several members of the clade, exemplified by Sorghum halepense (Johnsongrass) offer insights into weediness and invasion biology. The first sequence for a member of the clade, sorghum, as well as progress and challenges toward sequencing of additional members and the new opportunities that this will create, are also explored. Indeed, the very complexities that have hindered study of some clade members also offer intriguing opportunities to gain insight into fundamental questions such as roles of polyploidy in agricultural productivity and post-polyploidy evolution.

Experience shows that biotic stresses occur with different levels of intensity in nearly all agricultural areas around the world. The occurrence of insects, weeds and diseases caused by fungi, bacteria or viruses may not be relevant in a specific year but they usually harm yield in most years. Global warming has shifted the paradigm of biotic stresses in most growing areas, especially in the tropical countries, sparking intense discussions in scientific forums. This book was written with the idea of collecting in a single publication the most recent advances and discoveries concerning breeding for biotic stresses, covering all major classes of biotic challenges to agriculture and food production. Accordingly, it presents the state-of-the-art in plant stresses caused by all microorganisms, weeds and insects and how to breed for them. Complementing Plant Breeding for Abiotic Stress Tolerance, this book was written for scientists and students interested in learning how to breed for biotic stress scenarios, allowing them to develop a greater understanding of the basic mechanisms of resistance to biotic stresses and develop resistant cultivars.

The ability of plants to exchange RNA molecules and transcription factors between cells and tissues is a relatively recent discovery. However, all areas of research such as plant development, metabolism, and plant pathogen interactions now realize the importance of this phenomenon. In this book, experts from the field of intercellular transport deal with various aspects on intercellular transport of viruses and plant endogenous macromolecules such as transcription factors, small silencing-induced and micro RNAs, and other RNAs and their function as signals. The aim of the book is to provide the basic information on the cell-to-cell transport mechanism and to give an overview of the current knowledge of this relatively new field of research. To quote the words of W.J. Lucas "...pioneering discoveries in this field of cell-to-cell and long-distance signaling should certainly entice talented young scholars to join this frontier area of plant biology" . He is certainly right as we got only a first glimpse on the cellular factors regulating intercellular transport and the functional diversity of the ever-increasing number of proteins and RNA molecules found to move between cells.

Along the undisturbed shores, especially of the Mediterranean Sea and the European North Atlantic Ocean, is a quite widespread plant called Beta maritima by botanists, or more commonly sea beet. Nothing, for the inexperienced observer's eye, distinguishes it from surrounding wild vegetation. Despite its inconspicuous and nearly invisible flowers, the plant has had and will have invaluable economic and scientific importance. Indeed, according to Linne, it is considered "the progenitor of the beet crops possibly born from Beta maritima in some foreign country". Recent molecular research confirmed this lineage. Selection applied after domestication has created many cultivated types with different destinations. The wild plant always has been harvested and used both for food and as a medicinal herb. Sea beet crosses easily with the cultivated types. This facilitates the transmission of genetic traits lost during domestication, which selection processes aimed only at features immediately useful to farmers and consumers may have depleted. Indeed, as with several crop wild relatives, Beta maritima has been successfully used to improve cultivated beet's genetic resistances against many diseases and pests. In fact, sugar beet cultivation currently would be impossible in many countries without the recovery of traits preserved in the wild germplasm. Dr. Enrico Biancardi graduated from Bologna University. From 1977 until 2009, he was involved in sugar beet breeding activity by the Istituto Sperimentale per le Colture Industriali (ISCI) formerly Stazione Sperimentale di Bieticoltura (Rovigo, Italy), where he released rhizomania and cercospora resistant germplasm and collected seeds of Mediterranean sea beet populations as a genetic resource for breeding and ex situ conservation. Retired since 2009, he still collaborates with several working breeders, in particular, at the USDA Agricultural Research Stations, at the Chinese Academy of Agricultural Science (CAAS), and at the Athens University (AUA). He has edited books, books chapters and authored more than 150 papers. Dr. Lee Panella is a plant breeder and geneticist with the USDA-ARS at Fort Collins, Colorado. He earned his B.S. in Crop and Soil Science from Michigan State University, an M.S. in Plant Breeding from Texas A&M University, and a Ph.D. in genetics from the University of California at Davis. His research focus is developing disease resistant germplasm using sugar beet wild relatives. He is chairman of the USDA-ARS Sugar Beet Crop Germplasm Committee and has collected and worked extensively with sea beet. Dr. Robert T. Lewellen was raised on a ranch in Eastern Oregon and obtained a B.S. in Crop Science from Oregon State University followed by a Ph.D. from Montana State University in Genetics. From 1966 to 2008 he was a research geneticist for the USDA-ARS at Salinas, California, where he studied the genetics of sugar beet and as a plant breeder, often used sea beet as a genetic source to produce many pest and disease resistant sugar beet germplasm and parental lines, while authoring more than 100 publications.

With the predicted increase of the human population and the subsequent need for larger food supplies, root health in crop plants could play a major role in providing sustainable highly productive crops that can cope with global climate changes. While the essentiality of roots and their relation to plant performance is broadly recognized, less is known about their role in plant growth and development. "Root Genomics" examines how various new genomic technologies are rapidly being applied to the study of roots, including high-throughput sequencing and genotyping, TILLING, transcription factor analysis, comparative genomics, gene discovery and transcriptional profiling, post-transcriptional events regulating microRNAs, proteome profiling and the use of molecular markers such as SSRs, DArTs, and SNPs for QTL analyses and the identification of superior genes/alleles. The book also covers topics such as the molecular breeding of crops in problematic soils and the responses of roots to a variety of stresses.

Molecular farming in plants is a relatively young subject of sciences. As plants can offer an inexpensive and convenient platform for the large-scale production of recombinant proteins with various functions, the driven force from the giant market for recombinant protein pharmaceuticals and industrial enzymes makes this subject grow and advance very quickly. To summarize recent advances, current challenges and future directions in molecular farming, international authorities were invited to write this book for researchers, teachers and students who are interested in this subject. This book, with the focus on the most advanced cutting-edge breakthroughs, covers all the essential aspects of the field of molecular farming in plants: from expression technologies to downstream processing, from products to safety issues, and from current advances and holdups to future developments.

Deals with the historical perspectives and the current status of doubled haploid production along with its practical implications in basic and applied research. It highlights various haploid production methods with a comprehensive discussion on their pros and cons, bottlenecks, and embryogenic pathways. The review also describes in detail the results of molecular and genomic studies conducted to investigate the underlying principles of this spectacular technique that has changed the status of many species from recalcitrant to responsive over the last ninety years. "

Desiccation tolerance was essential when plants first began to conquer land, roughly 400 million years ago. While most desiccation-tolerant plants belong to basal phylogenetic taxa, this capacity has also evolved among some vascular plant species.

In this volume renowned experts treat plant desiccation tolerance at the organismic as well as at the cellular level. The diversity of ecophysiological adaptations and acclimations of cyanobacteria, eukaryotic algae, mosses, and lichens is addressed in several chapters. The particular problems of vascular plants during dehydration/rehydration cycles resulting not only from their hydraulic architectures, but also from severe secondary stresses associated with the desiccated state are discussed. Based on the treatment of desiccation tolerance at the organismic level, a second section of the book is devoted to the cell biological level. It delineates the general concepts of functional genomics, epigenetics, genetics, molecular biology and the sensing and signalling networks of systems biology involved in dehydration/rehydration cycles.

This book provides an invaluable compilation of current knowledge, which is a prerequisite for a better understanding of plant desiccation tolerance in natural as well as agro- and forest ecosystems where water is one of the most essential resources.

Mitochondria are the product of a long evolutionary history. It is now a well established fact that mitochondria did evolve from free living bacteria being the common ancestor of both, eukaryotic mitochondria and -proteobacteria. Advances in genome sequencing, the establishment of in organello and in vitro assays to name only a few, contributed significantly to advances in plant mitochondrial research. Second generation sequencing and the ability to directly sequence and analyse the whole plant transcriptome certainly will help to develop the research on plant mitochondria to another level in the future. In this book the current knowledge about plant mitochondria is presented in a series of detailed chapters, which have been organized in five main sections: (i) dynamics, genes and genomes; (ii) transcription and RNA processing; (iii) translation and import; (iv) biochemistry, regulation and function; and (v) mitochondrial dysfunction and repair. These sections consist of two to five chapters, each written by well-known specialists in the field. This book thus provides a comprehensive inside in the field of plant mitochondria for the specialist. The addition of a glossary and text boxes to each chapter provides easy access for readers from other subjects and hopefully will attract young scientist to the fascinating and exiting field of plant mitochondria."

The Genetics and Genomics of the Brassicaceae provides a review of this important family (commonly termed the mustard family, or Cruciferae). The family contains several cultivated species, including radish, rocket, watercress, wasabi and horseradish, in addition to the vegetable and oil crops of the Brassica genus. There are numerous further species with great potential for exploitation in 21st century agriculture, particularly as sources of bioactive chemicals. These opportunities are reviewed, in the context of the Brassicaceae in agriculture. More detailed descriptions are provided of the genetics of the cultivated Brassica crops, including both the species producing most of the brassica vegetable crops (B. rapa and B. oleracea) and the principal species producing oilseed crops (B. napus and B. juncea). The Brassicaceae also include important "model" plant species. Most prominent is Arabidopsis thaliana, the first plant species to have its genome sequenced. Natural genetic variation is reviewed for A. thaliana, as are the genetics of the closely related A. lyrata and of the genus Capsella. Self incompatibility is widespread in the Brassicaceae, and this subject is reviewed. Interest arising from both the commercial value of crop species of the Brassicaceae and the importance of Arabidopsis thaliana as a model species, has led to the development of numerous resources to support research. These are reviewed, including germplasm and genomic library resources, and resources for reverse genetics, metabolomics, bioinformatics and transformation. Molecular studies of the genomes of species of the Brassicaceae revealed extensive genome duplication, indicative of multiple polyploidy events during evolution. In some species, such as Brassica napus, there is evidence of multiple rounds of polyploidy during its relatively recent evolution, thus the Brassicaceae represent an excellent model system for the study of the impacts of polyploidy and the subsequent process of diploidisation, whereby the genome stabilises. Sequence-level characterization of the genomes of Arabidopsis thaliana and Brassica rapa are presented, along with summaries of comparative studies conducted at both linkage map and sequence level, and analysis of the structural and functional evolution of resynthesised polyploids, along with a description of the phylogeny and karyotype evolution of the Brassicaceae. Finally, some perspectives of the editors are presented. These focus upon the Brassicaceae species as models for studying genome evolution following polyploidy, the impact of advances in genome sequencing technology, prospects for future transcriptome analysis and upcoming model systems.

Reproductive biology is the basis of species improvement and a thorough understanding of this is needed for plant improvement, whether by conventional or biotechnological methods. This book presents an up to date and comprehensive description of reproduction in lower plants, gymnosperms and higher plants. It covers general plant biology, pollination, pollen-pistil interaction, post-fertilization changes, and seed dormancy.

Plant tissue culture is an essential component of Biotechnology which has gained unbeatable recognition in plant sciences for successful micropropagation and improvement of plant species, leading to the commercial application. A number of plant species have been investigated around the globe. This book presents current research on the application of in vitro technology in the improvement of Balanites aegyptiaca Del., a medicinal plant of semi-arid tropics. The worldwide importance of forestry, summed to the lengthy generation cycles of tree species, makes unavoidable development of new technologies that complement conventional tree breeding programmes in order to obtain improved genotypes. Recently, a new set of tools has become available in the past 20 years that combined with traditional plant breeding will allow scientists to generate products that are genetically improved varieties of the future. These set of tools come under the general title of Biotechnology . The three specific biotechnological tools have been successfully used in several programmes of plant conservation, namely, tissue culture techniques for in vitro propagation, the use of molecular markers to assess the degree of variability among population and techniques of long-term conservation such as encapsulation and cryopreservation. Plant tissue culture techniques are particularly relevant and become an alternative not only for large scale propagation of individuals that are threatened, reduce production costs and increase gains to the industry, but also to provide ecological advantages as in phytoremediation or in the establishment of artificial plantings in weed infested site. The book gives a complete documentation of the results and demonstration of Balanites aegyptiaca conducted by the authors over the past 5 years. The end-to-end approach developed through plant tissue culture techniques is reflected in the book and there has been a successful transfer of technology from lab to field. The authors hope that this information would provide valuable data and also be a reference material for future research activities in this area."

To cope with the increasing problems created by agrochemicals such as plant fertilizers, pesticides and other plant protection agents, biological alternatives have been developed over the past years. These include biopesticides, such as bacteria for the control of plant diseases, and biofertilizer to improve crop productivity and quality. Especially plant growth promoting rhizobacteria (PGPR) are as effective as pure chemicals in terms of plant growth enhancement and disease control, in addition to their ability to manage abiotic and other stresses in plants. The various facets of these groups of bacteria are treated in this Microbiology Monograph, with emphasis on their emergence in agriculture. Further topics are Bacillus species that excrete peptides and lipopeptides with antifungal, antibacterial and surfactant activity, plant-bacteria-environment interactions, mineral-nutrient exchange, nitrogen assimilation, biofilm formation and cold-tolerant microorganisms.

SpringerBriefs in Biotech Patents presents timely reports on intellectual properties (IP) issues and patent aspects in the field of biotechnology. In this volume the limits of patentability are addressed, a question that is often raised when it comes to biotechnological inventions: The first section addresses current issues in the patentability of plants produced by essentially biological processes including the controversy between farmer's privilege and patent exhaustion with respect to seeds in the US. The second section examines the patentability of human embryonic stem cells in Europe and the US, also considering alternative technologies with respect to their practicability and patentability. The third section focuses on the patentability of genes and nucleic acids, especially the issue of patenting of encoding genes and nucleic acids.

Here, the author has compiled data on about 550 oil-bearing plant species with respect to their content of unsaponifiable matters and oils. This unique information resource offers important information for research and development of food products such as neutraceuticals as well as cosmetics. Unsaponifiable matters have varying effects: Conservation and stability (e.g. lignans, tocopherols, tocotrienols), anti-inflammatory properties (triterpene alcohols), cholesterol-lowering (sterols), well tolerated occlusive effect on the skin (squalene). Information is provided in a clear and systematic fashion, including data on relevant chemical families and pertinent chemical structures. Also included is a thesaurus of English, Latin and French plant species names as well as 655 references to the scientific literature.