Chronic disease states of aging should be viewed through the prism of metabolism and biophysical processes at all levels of physiological organization present in the human body. This book describes the building blocks of understanding from a reasonable but not high-level technical language viewpoint, employing the perspective of a clinical physician. It brings together concepts from five specific branches of physics relevant to biology and medicine, namely, biophysics, classical electromagnetism, thermodynamics, systems biology and quantum mechanics. Key Features: Broad and up-to-date overview of the field of metabolism, especially connecting the spectrum of topics that range from modern physical underpinnings with cell biology to clinical practice. Provides a deeper basic science and interdisciplinary understanding of biological systems that broaden the perspectives and therapeutic problem solving. Introduces the concept of the Physiological Fitness Landscape, which is inspired by the physics of phase transitions This first volume in a two-volume set, primarily targets an audience of clinical and science students, biomedical researchers and physicians who would benefit from understanding each other's language.

This book provides a comprehensive overview of modern computer-based techniques for analyzing the structure, properties and dynamics of biomolecules and biomolecular processes. It is organized in four main parts; the first one deals with methodology of molecular simulations; the second one with applications of molecular simulations; the third one introduces bioinformatics methods and the use of experimental information in molecular simulations; the last part reports on selected applications of molecular quantum mechanics. This second edition has been thoroughly revised and updated to include the latest progresses made in the respective field of research.

This book is the first to be entirely devoted to the challenging art of handling membrane proteins out of their natural environment, a key process in biological and pharmaceutical research, but one plagued with difficulties and pitfalls. Written by one of the foremost experts in the field, Membrane Proteins in Aqueous Solutions is accessible to any member of a membrane biology laboratory. After presenting the structure, functions, dynamics, synthesis, natural environment and lipid interactions of membrane proteins, the author discusses the principles of extracting them with detergents, the mechanisms of detergent-induced destabilization, countermeasures, and recent progress in developing detergents with weaker denaturing properties. Non-conventional alternatives to detergents, including bicelles, nanodiscs, amphipathic peptides, fluorinated surfactants and amphipols, are described, and their relative advantages and drawbacks are compared. The synthesis and solution properties of the various types of amphipols are presented, as well as the formation and properties of membrane protein/amphipol complexes and the transfer of amphipol-trapped proteins to detergents, nanodiscs, lipidic mesophases, or living cells. The final chapters of the book deal with applications: membrane protein in vitro folding and cell-free expression, solution studies, NMR, crystallography, electron microscopy, mass spectrometry, amphipol-mediated immobilization of membrane proteins, and biomedical applications. Important features of the book include introductory sections describing foundations as well as the state-of-the-art for each of the biophysical techniques discussed, and topical tables which organize a widely dispersed literature. Boxes and annexes throughout the book explain technical aspects, and twelve detailed experimental protocols, ranging from in vitro folding of membrane proteins to single-particle electron cryomicroscopy, have been contributed by and commented on by experienced users. Membrane Proteins in Aqueous Solutions offers a concise, accessible introduction to membrane protein biochemistry and biophysics, as well as comprehensive coverage of the properties and uses of conventional and non-conventional surfactants. It will be useful both in basic and applied research laboratories and as a teaching aid for students, instructors, researchers, and professionals within the field.

X-ray imaging is a corner stone of breast cancer diagnosis. By exploiting the phase shift of X-rays rather than their attenuation, phase-contrast tomography has the potential to dramatically increase the visibility of small and low contrast features, thus leading to better diagnosis. This thesis presents research on the first synchrotron-based project developing a clinical phase-contrast breast computed tomography (CT) setup at Elettra, the Italian Syncrotron Radiation Facility. This book includes a comprehensive theoretical background on propagation-based phase-contrast imaging, exploring and extending the most recent image formation models. Along with theory, many practical implementation and optimization issues, ranging from detector-specific processing to setup geometry, are tackled on the basis of a large number of experimental evidences. Most of the modelling results and data analysis have general validity, being a valuable framework for optimization of phase-contrast setups. Results obtained at synchrotron are also compared with "real world" laboratory sources: both a first-of-its-kind comparison with one of the few hospital breast CT systems and a state-of-the-art implementation of monochromatic phase-contrast micro-tomography with a conventional rotating anode source are presented. On a more general level, this work sheds a light on the importance of synchrotron-based clinical programs, which are key to trigger the long-anticipated transition of phase-contrast imaging from synchrotrons to hospitals.

Broad and up-to-date overview of the field of metabolic aspects of health and chronic disease development, especially connecting the spectrum of topics that range from molecular clocks to stress response to nuclear hormone receptors and the role of microbiota in human health. Provides a deeper basic science and interdisciplinary understanding of biological systems that broaden the perspectives and therapeutic problem solving by elaborating on the usefulness of the Physiological Fitness Landscape. Describes the importance of insulin resistance in metabolic disease, especially diabetes but also includes links to cancer and Alzheimer's disease. Examines the process of aging from the perspective of metabolic decline illustrating it with the Physiological Fitness Landscape.

Stimulates readers to recognize holistic nature of cellular bioenergetics. Encourages interdisciplinary approach to bioenergetics. Changes paradigm from negative to positive meaning for entropy increase. Connects biological to thermodynamic evolution. Illustrates how beautiful structures contribute to evolution of universe.

Fully updated throughout, with new sections on image interpretation and image reconstruction Overview of the current state of experimental and clinical use of EIT as well as active research developments Overview of related research in geophysics, industrial process tomography, magnetic-resonance and magnetic-induction impedance imaging

This book explores the remarkable information correspondences and probability structures of proteins. Correspondences are pervasive in biochemistry and bioinformatics: proteins share homologies, folding patterns, and mechanisms. Probability structures are just as paramount: folded state graphics reflect Angstrom-scale maps of electron density. The author explores protein sequences (primary structures), both individually and in sets (systems) with the help of probability and information tools. This perspective will enhance the reader's knowledge of how an important class of molecules is designed and put to task in natural systems, and how we can approach class members in hands-on ways.

Systems-Level Modelling of Microbial Communities: Theory and Practice introduces various aspects of modelling microbial communities and presents a detailed overview of the computational methods which have been developed in this area. This book is aimed at researchers in the field of computational/systems biology as well as biologists/experimentalists studying microbial communities, who are keen on embracing the concepts of computational modelling. The primary focus of this book is on methods for modelling interactions between micro-organisms in a community, with special emphasis on constraint-based and network-based modelling techniques. A brief overview of population- and agent-based modelling is also presented. Lastly, it covers the experimental methods to understand microbial communities, and provides an outlook on how the field may evolve in the coming years.

Physical oncology has the potential to revolutionize cancer research and treatment. The fundamental rationale behind this approach is that physical processes, such as transport mechanisms for drug molecules within tissue and forces exchanged by cancer cells with tissue, may play an equally important role as biological processes in influencing progression and treatment outcome. This book introduces the emerging field of physical oncology to a general audience, with a focus on recent breakthroughs that help in the design and discovery of more effective cancer treatments. It describes how novel mathematical models of physical transport processes incorporate patient tissue and imaging data routinely produced in the clinic to predict the efficacy of many cancer treatment approaches, including chemotherapy and radiation therapy. By helping to identify which therapies would be most beneficial for an individual patient, and quantifying their effects prior to actual implementation in the clinic, physical oncology allows doctors to design treatment regimens customized to each patient's clinical needs, significantly altering the current clinical approach to cancer treatment and improving the outcomes for patients.

Smart materials are the way of the future in a variety of fields, from biomedical engineering and chemistry to nanoscience, nanotechnology, and robotics. Featuring an interdisciplinary approach to smart materials and structures, this second edition of Artificial Muscles: Applications of Advanced Polymeric Nanocomposites has been fully updated to thoroughly review the latest knowledge of ionic polymeric conductor nanocomposites (IPCNCs), including ionic polymeric metal nanocomposites (IPMNCs) as biomimetic distributed nanosensors, nanoactuators, nanotransducers, nanorobots, artificial muscles, and electrically controllable intelligent polymeric network structures. Authored by one of the founding fathers of the field, the book introduces fabrication and manufacturing methods of several electrically and chemically active ionic polymeric sensors, actuators, and artificial muscles, as well as a new class of electrically active polymeric nanocomposites and artificial muscles. It also describes a few apparatuses for modeling and testing various artificial muscles to show the viability of chemoactive and electroactive muscles. It presents the theories, modeling, and numerical simulations of ionic polymeric artificial muscles' electrodynamics and chemodynamics and features current industrial and medical applications of IPMNCs. By covering the fabrication techniques of and novel developments in advanced polymeric nanocomposites, this second edition continues to provides an accessible yet solid foundation to the subject while stimulating further research. Key features: Fully up to date with the latest cutting-edge discoveries in the field Authored by a world expert in the subject area Explores the exciting and growing topic of smart materials in medicine Mohsen Shahinpoor is Professor of Mechanical Engineering at the University of Maine and a leading expert in artificial muscles.

Includes examples on such cases as solidification of alloys, chemically-driven convection of dissociating gases, temperature-dependent predator-prey mite systems, multi-layer and two-phase fluid phenomena, viral-target cell interactions, diffusive and gravitational instabilities, and chemical, material science, optical, and ecological Turing patterns. Aims to make the process of quantification of scientific phenomena transparent. Is a hybrid semi-autobiographical account of research results and a monograph on pattern formation.

Blood microcirculation is essential to our bodies for the successful supply of nutrients, waste removal, oxygen delivery, homeostasis, controlling temperature, wound healing, and active immune surveillance. This book provides a physical introduction to the subject and explores how researchers can successfully describe, understand, and predict behaviours of blood flow and blood cells that are directly linked to these important physiological functions. Using practical examples, this book explains how the key concepts of physics are related to blood microcirculation and underlie the dynamic behavior of red blood cells, leukocytes, and platelets. This interdisciplinary book will be a valuable reference for researchers and graduate students in biomechanics, fluid mechanics, biomedical engineering, biological physics, and medicine. Features: The first book to provide a physical perspective of blood microcirculation Draws attention to the potential of this physical approach for novel applications in medicine Edited by specialists in this field, with chapter contributions from subject area specialists

The book discusses various aspects of biophysics. It starts from the popular article on neurobiology to quantum biology and ends up with the consciousness of a human being and in the universe. The authors have covered eight nine different aspects of natural intelligence, starting from time crystal found in the chemical biology to the vibrations and the resonance of proteins. They have covered a wide spectrum of hierarchical communication among different biological systems. Most importantly, authors have taken an utmost care that even school-level students fall in love with biophysics; it is simple and more of a textbook and definitely bring the readers to a world of biology and physics like never before. Most authors are experienced academicians, and they have used lucid and simple language to make the content interesting for the readers.

The contributed volume puts emphasis on a superior role of water in (bio)systems exposed to a mechanical stimulus. It is well known that water plays an extraordinary role in our life. It feeds mammalian or other organism after distributing over its whole volume to support certain physiological and locomotive (friction-adhesion) processes to mention but two of them, both of extreme relevance. Water content, not only in the mammalian organism but also in other biosystems such as whether those of soil which is equipped with microbiome or the ones pertinent to plants, having their own natural network of water vessels, is always subjected to a force field.The decisive force field applied to the biosystems makes them biomechanically agitated irrespective of whether they are subjected to external or internal force-field conditions. It ought to be noted that the decisive mechanical factor shows up in a close relation with the space-and-time scale in which it is causing certain specific phenomena to occur.The scale problem, emphasizing the range of action of gravitational force, thus the millimeter or bigger force vs. distance scale, is supposed to enter the so-called macroscale approach to water transportation through soil or plants' roots system. It is merely related to a percolation problem, which assumes to properly inspect the random network architecture assigned to the biosystems invoked. The capillarity conditions turn out to be of prior importance, and the porous-medium effect has to be treated, and solved in a fairly approximate way.The deeper the scale is penetrated by a force-exerting and hydrated agent the more non-gravitational force fields manifest. This can be envisaged in terms of the corresponding thermodynamic (non-Newtonian) forces, and the phenomena of interest are mostly attributed to suitable changes of the osmotic pressure. In low Reynolds number conditions, thus in the (sub)micrometer distance-scale zone, they are related with the corresponding viscosity changes of the aqueous, e.g. cytoplasmatic solutions, of semi-diluted and concentrated (but also electrolytic) characteristics. For example, they can be observed in articulating systems of mammals, in their skin, and to some extent, in other living beings, such as lizards, geckos or even insects. Through their articulating devices an external mechanical stimulus is transmitted from macro- to nanoscale, wherein the corresponding osmotic-pressure conditions apply. The content of the proposed work can be distributed twofold. First, the biomechanical mammalian-type (or, similar) systems with extraordinary relevance of water for their functioning will be presented, also including a presentation of water itself as a key physicochemical system/medium. Second, the suitably chosen related systems, mainly of soil and plant addressing provenience, will be examined thoroughly. As a common denominator of all of them, it is proposed to look at their hydrophobic and/or (de)hydration effects, and how do they impact on their basic mechanical (and related, such as chemo-mechanical or piezoelectric, etc.) properties. An additional tacit assumption employed throughout the monograph concerns statistical scalability of the presented biosystems which is equivalent to take for granted a certain similarity between local and global system's properties, mostly those of mechanical nature. The presented work's chapters also focus on biodiversity and ecological aspects in the world of animals and plants, and the related systems. The chapters' contents underscore the bioinspiration as the key landmark of the proposed monograph.

Electrons are involved in all electrical phenomena, and living cells cannot be an exception. This book takes on a decidedly different approach to existing texts on electrophysiology, by considering electrical physiological processes from the viewpoint of electron flow, rather than the conventional notion of ion movement. It concisely describes the theoretical background of electron density and cellular voltage, before exploring thought-provoking questions such as the relationship between electrolyte distribution and transmembrane potential, and the source of electricity generation in living cells. A new electromagnetic theory of muscular function is presented, and all topics of relevance - including the electrophysiology of invertebrates, plants, fungi and bacteria - are comprehensively covered. Using plain language and more than 40 original illustrations, the author has designed each chapter to provide a succinct overview of an individual topic in a format that appeals to both the expert and the uninitiated. Electromagnetism, Quanta, and Electron Flow in the Electrophysiology of Living Cells proffers a refreshingly new way to understand a fascinatingly old subject.

This thesis establishes a multifaceted extension of the deterministic control framework that has been a workhorse of nonequilibrium statistical mechanics, to stochastic, discrete, and autonomous control mechanisms. This facilitates the application of ideas from stochastic thermodynamics to the understanding of molecular machines in nanotechnology and in living things. It also gives a scale on which to evaluate the nonequilibrium energetic efficiency of molecular machines, guidelines for designing effective synthetic machines, and a perspective on the engineering principles that govern efficient microscopic energy transduction far from equilibrium. The thesis also documents the author's design, analysis, and interpretation of the first experimental demonstration of the utility of this generally applicable method for designing energetically-efficient control in biomolecules. Protocols designed using this framework systematically reduced dissipation, when compared to naive protocols, in DNA hairpins across a wide range of experimental unfolding speeds and between sequences with wildly different physical characteristics.

Ion channels generate bioelectricity. Recent findings have documented the biophysical properties, the structure, assembly and regulation, and function and dysfunction of nonclassical nervous system ion channels. This book reviews nonclassical ion channel research, ranging from the basic biology, structure, regulations to their functions not only in normal physiology but also neurological disorders, using a variety of cutting-edge techniques and novel animal models.

Which fungus is as sensitive to light as the human eye? What are the myths and facts about the ozone hole, tanning, skin cancer, and sunscreens? What is the effect of light on butterfly copulation? This entertaining collection of essays explores how various organisms -- including archaebacteria, slime molds, fungi, plants, insects, and humans -- sense and respond to sunlight.

The essays in Peter A. Ensminger's book cover vision, photosynthesis, and phototropism, as well as such unusual topics as the reason why light causes beer to develop a "skunky" odor. He introducec us to the kinds of eyes that have evolved in different animals, including those in a species of shrimp that is ostensibly eyeless; gives us a better appreciation of color vision; explains how plowing fields at night may be used to control weeds; and tells about variegate porphyria, a metabolic disease that makes people very sensitive to sunlight and may have afflicted King George III of England.

These engaging essays present a complicated yet fascinating subject in an accessible way. The book will be treasured by anyone interested in the wonders of biology.

This text is an introductory compilation of basic concepts, methods and applications in the field of spectroscopy. It discusses new radiation sources such as lasers and synchrotrons and describes the linear response together with the basic principles and the technical background for various scattering experiments.

This unique book provides an accessible introduction to both the scientific background and the key people involved in the discovery and use of radiation and radioactivity. It begins by providing a short history of radiation exposures and radiation poisoning; from the early inappropriate use of X-rays and radium cures through the misadventures of the Manhattan Project and the Chernobyl disaster, to the high-profile and deliberate poisoning of Alexander Litvinenko in London with polonium-210, which gave rise to worldwide media attention. The chapters provide a catalogue of deliberate criminal acts, unfortunate accidents, and inadvertent radiation exposures, exploring well-known events in detail, as well as some not so well-known occurrences. It works through the topics by focusing on human stories and events and their biological impact. In addition, it covers descriptions of the beneficial uses of radiation and radioactivity. This book can be enjoyed by any reader with a general interest in science, as well as by students and professionals within the scientific and medical communities. Key features Authored by a subject area specialist who has worked in both clinical practice and academia and was involved with the national media following incidents of national and international importance Provides a unique human perspective into well-known and some lesser known events and a concise history of the discovery of radiation and the events that followed Adds scientific and medical background to a subject of high media interest

This unique book provides an accessible introduction to both the scientific background and the key people involved in the discovery and use of radiation and radioactivity. It begins by providing a short history of radiation exposures and radiation poisoning; from the early inappropriate use of X-rays and radium cures through the misadventures of the Manhattan Project and the Chernobyl disaster, to the high-profile and deliberate poisoning of Alexander Litvinenko in London with polonium-210, which gave rise to worldwide media attention. The chapters provide a catalogue of deliberate criminal acts, unfortunate accidents, and inadvertent radiation exposures, exploring well-known events in detail, as well as some not so well-known occurrences. It works through the topics by focusing on human stories and events and their biological impact. In addition, it covers descriptions of the beneficial uses of radiation and radioactivity. This book can be enjoyed by any reader with a general interest in science, as well as by students and professionals within the scientific and medical communities. Key features Authored by a subject area specialist who has worked in both clinical practice and academia and was involved with the national media following incidents of national and international importance Provides a unique human perspective into well-known and some lesser known events and a concise history of the discovery of radiation and the events that followed Adds scientific and medical background to a subject of high media interest