This book provides a comprehensive overview of the design, generation and characterization of minimal cell systems. Written by leading experts, it presents an in-depth analysis of the current issues and challenges in the field, including recent advances in the generation and characterization of reduced-genome strains generated from model organisms with relevance in biotechnology, and basic research such as Escherichia coli, Corynebacterium glutamicum and yeast. It also discusses methodologies, such as bottom-up and top-down genome minimization strategies, as well as novel analytical and experimental approaches to characterize and generate minimal cells. Lastly, it presents the latest research related to minimal cells of serveral microorganisms, e.g. Bacillus subtilis. The design of biological systems for biotechnological purposes employs strategies aimed at optimizing specific tasks. This approach is based on enhancing certain biological functions while reducing other capacities that are not required or that could be detrimental to the desired objective. A highly optimized cell factory would be expected to have only the capacity for reproduction and for performing the expected task. Such a hypothetical organism would be considered a minimal cell. At present, numerous research groups in academia and industry are exploring the theoretical and practical implications of constructing and using minimal cells and are providing valuable fundamental insights into the characteristics of minimal genomes, leading to an understanding of the essential gene set. In addition, research in this field is providing valuable information on the physiology of minimal cells and their utilization as a biological chassis to which useful biotechnological functions can be added.

For humankind, the most irreducible idea is the concept of life itself. In order to understand that life is essentially an infinite process, transmitted from generation to generation, this book takes the reader on a fascinating journey that unravels one of our greatest mysteries. It begins with the premise that life is a fact-that it is everywhere; that it takes infinite forms; and, most importantly, that it is intrinsically self-perpetuating. Rather than exploring how the first living forms emerged in our universe, the book begins with our first primordial ancestor cell and tells the story of life-how it began, when that first cell diversified into many other cell types and organisms, and how it has continued until the present day. On this journey, the author covers the fundaments of biology such as cell division, diversity, regeneration, repair and death. The rather fictional epilogue even goes one step further and discusses ways how to literally escape the problem of limited recourse and distribution on our planet by looking at life outside the solar system. This book is designed to explain complex ideas in biology simply, but not simplistically, with a special emphasis on plain and accessible language as well as a wealth of hand-drawn illustrations. Thus, it is suitable not only for students seeking for an introduction into biological concepts and terminology, but for everyone with an interest in the fundamentals of life at the crossroad of evolutionary and cell biology.

Over time the complex idea of "species" has evolved, yet its meaning is far from resolved. This comprehensive work is a fresh look at an idea central to the field of biology by tracing its history from antiquity to today. Species is a benchmark exploration and clarification of a concept fundamental to the past, present, and future of the natural sciences. In this edition, a section is added on the debate over species since the time of the New Synthesis, and brings the book up to date. A section on recent philosophical debates over species has also been added. This edition is better suited non-specialists in philosophy, so that it will be of greater use for scientists wishing to understand how the notion came to be that living organisms form species. Key Selling Features: Covers the philosophical and historical development of the concept of "species" Documents that variation was recognized by pre-Darwinian scholars Includes a section on the debates since the time of the New Synthesis Better suited to non-philosophers

Darwin's greatest accomplishment was to show how life might be explained as the result of natural selection. But does Darwin's theory mean that life was unintended? William A. Dembski argues that it does not. In this book Dembski extends his theory of intelligent design. Building on his earlier work in The Design Inference (Cambridge, 1998), he defends that life must be the product of intelligent design. Critics of Dembski's work have argued that evolutionary algorithms show that life can be explained apart from intelligence. But by employing powerful recent results from the No Free Lunch Theory, Dembski addresses and decisively refutes such claims. As the leading proponent of intelligent design, Dembski reveals a designer capable of originating the complexity and specificity found throughout the cosmos. Scientists and theologians alike will find this book of interest as it brings the question of creation firmly into the realm of scientific debate.

Michael Ruse, a leading expert on Charles Darwin, presents a fictional dialogue among characters with sharply contrasting positions regarding the tensions between science and religious belief. Ruse's main characters-an atheist scientist, a skeptical historian and philosopher of science, a relatively liberal female Episcopalian priest, and a Southern Baptist pastor who denies evolution-passionately argue about pressing issues, in a context framed within a television show: "Science versus God- Who is Winning?" These characters represent the different positions concerning science and religion often held today: evolution versus creation, the implications of Christian beliefs upon technological advances in medicine, and the everlasting debate over free will. The second edition of this innovative text incorporates the influence of Eastern religions and philosophies on the debate on human origins, broadening the contextual reach of the dialogue into comparative philosophy and religious studies.

This book attempts to develop a Marxist theory of the human individual. It contends that the standard description of the human as a bio-psycho-social being is fundamentally deficient as it doesn't specify which of these attributes is the determining one. As long as this is not done, the real nature of humanity cannot be uncovered.

This book offers a thorough reanalysis of Charles Darwin's Origin of Species, which for many people represents the work that alone gave rise to evolutionism. Of course, scholars today know better than that. Yet, few resist the temptation of turning to the Origin in order to support it or reject it in light of their own work. Apparently, Darwin fills the mythical role of a founding figure that must either be invoked or repudiated. The book is an invitation to move beyond what is currently expected of Darwin's magnum opus. Once the rhetorical varnish of Darwin's discourses is removed, one discovers a work of remarkably indecisive conclusions. The book comprises two main theses: (1) The Origin of Species never remotely achieved the theoretical unity to which it is often credited. Rather, Darwin was overwhelmed by a host of phenomena that could not fit into his narrow conceptual framework. (2) In the Origin of Species, Darwin failed at completing the full conversion to evolutionism. Carrying many ill-designed intellectual tools of the 17th and 18th centuries, Darwin merely promoted a special brand of evolutionism, one that prevented him from taking the decisive steps toward an open and modern evolutionism. It makes an interesting read for biologists, historians and philosophers alike.

This volume explains the key ideas, questions and methods involved in studying the hidden world of vibrational communication in animals. The authors dispel the notion that this form of communication is difficult to study and show how vibrational signaling is a key to social interactions in species that live in contact with a substrate, whether it be a grassy lawn, a rippling stream or a tropical forest canopy. This ancient and widespread form of social exchange is also remarkably understudied. A frontier in animal behavior, it offers unparalleled opportunities for discovery and for addressing general questions in communication and social evolution. In addition to reviews of advances made in the study of several animal taxa, this volume also explores topicssuch as vibrational communication networks, the interaction of acoustic and vibrational communication, the history of the field, the evolution of signal production and reception and establishing a common vocabulary."

Up until now, there has been no explanation of how the outer layers of human behavior helped drive the evolution of ancient reptiles into modern-day humans. How did behavioral phenomena such as play, learning by copying, language, REM sleep, and storytelling influence the development of humanity as a whole?

The development of play was particularly important in the evolutionary process, as it provided the bridge between the instinctive brains of reptiles to the powerful brains of birds and mammals. Play, however, is just one factor that can help explain evolution and the development of human behavior.

In this book, you'll consider a gamut of issues, including Evolutionary stages The paradox of animals that feed on animals The importance and repercussions of copy-learning Primitive games The emergence of sleep The scientific community needs to think in new ways to accurately look at human evolutionary history. Take that leap, and consider new explanations of old behavior as you read The Evolutionary Origin of Human Behavior: How Play and Evolution Carried Us from Our Reptile Predecessors to the Storytellers We Are.

This volume details the function of hydrocarbon seeps, their evolution over time, the most important seep occurrences and the fauna present in ancient hydrocarbon seeps. While several publications exist that cover modern seeps and vents, fossil seeps only constitute a small component of the literature. As such, many geologists, stratigraphers and paleontologists, as well as undergraduates and graduate students, are not very familiar with ancient hydrocarbon seep deposits and their associated fauna. This text is the first to comprehensively discuss the nature of such animal groups and how to recognize them. In addition to summarizing available knowledge on these topics for specialists in the field, this book offers the background needed to be of use to students as well as the wider community of geologists and paleontologists.

An expert palaeoarchaeologist reveals how our understanding of the evolution of our species has been transformed by momentous discoveries and technological advancements. Who are we? How do scientists define Homo sapiens, and how does our species differ from the extinct hominins that came before us? This illuminating book explores how the latest scientific advances, especially in genetics, are revolutionizing our understanding of human evolution. Paul Pettitt reveals the extraordinary story of how our ancestors adapted to unforgiving and relentlessly changing climates, leading to remarkable innovations in art, technology and society that we are only now beginning to comprehend. Drawing on twenty-five years of experience in the field, Paul Pettitt immerses readers in the caves and rockshelters that provide evidence of our African origins, dispersals to the far reaches of Eurasia, Australasia and ultimately the Americas. Popular accounts of the evolution of Homo sapiens emphasize biomolecular research, notably genetics, but this book also draws from the wealth of information from specific excavations and artefacts, including the author's own investigations into the origins of art and how it evolved over its first 25,000 years. He focuses in particular on behaviour, using archaeological evidence to bring an intimate perspective on lives as they were lived in the almost unimaginably distant past.

This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book's respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.

This new and significantly updated authored dictionary is a unique glossary of paleontological terms, taxa, localities, and concepts. It focuses primarily on identifying the most significant groups of fossil animals and plants in relation to their evolution and phylogeny. It also focuses on mass extinctions, on taxa that are problematic in some significant way, on the principal fossil-Lagerstatten of the world, and on historical turning points marked by index fossils. Although there are many current resources on the subject, none contains an accurate representation of the paleontological lexicon. Although well aware that the fast-changing field of paleontology will always defy any attempt at complete description, the author has attempted to provide an accurate and comprehensive set of about 4,000 entries that will be useful to professionals as well as to general readers of scientific literature without a background in paleontology.

For more than two decades the concept of phenotypic plasticity has allowed researchers to go beyond the nature-nurture dichotomy to gain deeper insights into how organisms are shaped by the interaction of genetic and ecological factors. "Phenotypic Plasticity: Beyond Nature and Nurture" is the first work to synthesize the burgeoning area of plasticity studies, providing a conceptual overview as well as a technical treatment of its major components.

Phenotypic plasticity integrates the insights of ecological genetics, developmental biology, and evolutionary theory. Plasticity research asks foundational questions about how living organisms are capable of variation in their genetic makeup and in their responses to environmental factors. For instance, how do novel adaptive phenotypes originate? How do organisms detect and respond to stressful environments? What is the balance between genetic or natural constraints (such as gravity) and natural selection? The author begins by defining phenotypic plasticity and detailing its history, including important experiments and methods of statistical and graphical analysis. He then provides extended examples of the molecular basis of plasticity, the plasticity of development, the ecology of plastic responses, and the role of costs and constraints in the evolution of plasticity. A brief epilogue looks at how plasticity studies shed light on the nature/nurture debate in the popular media.

"Phenotypic Plasticity: Beyond Nature and Nurture" thoroughly reviews more than two decades of research, and thus will be of interest to both students and professionals in evolutionary biology, ecology, and genetics.

The human foot is a unique and defining characteristic of our anatomy. Most primates have grasping, prehensile feet, whereas the human foot stands out as a powerful non-grasping propulsive lever that is central to our evolution as adept bipedal walkers and runners and defines our lineage. Very few books have compiled and evaluated key research on the primate foot and provided a perspective on what we know and what we still need to know. This book serves as an essential companion to "The Evolution of the Primate Hand" volume, also in the Developments in Primatology series. This book includes chapters written by experts in the field of morphology and mechanics of the primate foot, the role of the foot in different aspects of primate locomotion (including but not limited to human bipedalism), the "hard evidence" of primate foot evolution including fossil foot bones and fossil footprints, and the relevance of our foot's evolutionary history to modern human foot pathology. This volume addresses three fundamental questions: (1) What makes the human foot so different from that of other primates? (2) How does the anatomy, biomechanics, and ecological context of the foot and foot use differ among primates and why? (3) how did foot anatomy and function change throughout primate and human evolution, and why is this evolutionary history relevant in clinical contexts today? This co-edited volume, which relies on the insights of leading scholars in primate foot anatomy and evolution provides for the first time a comprehensive review and scholarly discussion of the primate foot from multiple perspectives. It is accessible to readers at different levels of inquiry (e.g., undergraduate/graduate students, postdoctoral research, other scholars outside of biological anthropology). This volume provides an all-in-one resource for research on the comparative and functional morphology and evolution of the primate foot.

This book, published in two volumes, provides the most comprehensive review of lamprey biology since Hardisty and Potter's "The Biology of Lampreys" published more than 30 years ago. This second volume offers a synthesis of topics related to the lamprey gonad (e.g., lamprey sex ratios, sex determination and sex differentiation, sexual maturation, and sex steroids), the artifical propagation of lampreys, post-metamorphic feeding and the evolution of alternative feeding and migratory types, the history and status of sea lamprey control in the Laurentian Great Lakes and Lake Champlain, and an overview of contributions of lamprey developmental studies for understanding vertebrate evolution.

The emphasis in this volume is on the structure and functional design of the integument. The book starts with a brief introduction to some basic principles of physics (mechanics) including Newton's Three Laws of Motion. These principles are subsequently used to interpret the problems animals encounter in motion. It is in only the last 40 or so years that we have begun to understand how important a role the integument plays in the locomotion of many marine vertebrates. This involves the crossed-fiber architecture, which was first discovered in a classic study on nemertean worms. As a design principle we see that the crossed-fiber architecture is ubiquitous in nature. Research on some of the most dynamic marine vertebrates of the oceans - tuna, dolphins and sharks, and the extinct Jurassic ichthyosaurs - shows precisely how the crossed-fiber architecture contributes to high-speed swimming and (in lamnid sharks) may even aid in energy conservation. However, this design principle is not restricted to animals in the marine biota but is also found as far afield as the dinosaurs and, most recently, has been revealed as a major part of the microstructure of the most complex derivative of the integument, the feather. We see that a variety of phylogenetically diverse vertebrates take to the air by using skin flaps to glide from tree to tree or to the ground, and present detailed descriptions of innovations developed in pursuit of improved gliding capabilities in both extinct and modern day gliders. But the vertebrate integument had even greater things in store, namely true or flapping flight. Pterosaurs were the first vertebrates to use the integument as a membrane in true flapping flight and these interesting extinct animals are discussed on the basis of past and cutting-edge research , most intriguingly with respect to the structure of the flight membrane. Bats, the only mammals that fly, also employ integumental flight membranes. Classic research on bat flight is reviewed and supplemented with the latest research, which shows the complexities of the wing beat cycle to be significantly different from that of birds, as revealed by particle image velocimetry. The book's largest chapter is devoted to birds, given that they make up nearly half of the over 22,000 species of tetrapods. The flight apparatus of birds is unique in nature and is described in great detail, with innovative research highlighting the complexity of the flight structures, bird flight patterns, and behavior in a variety of species. This is complimented by new research on the brains of birds, which shows that they are more complex than previously thought. The feather made bird flight possible, and was itself made possible by -keratin, contributing to what may be a unique biomechanical microstructure in nature, a topic discussed in some depth. A highly polarized subject concerns the origin of birds and of the feather. Alleged fossilized protofeathers (primal simple feathers) are considered on the basis of histological and taphonomic investigative studies in Chapter 6. Finally, in Chapter 7 we discuss the controversies associated with this field of research. Professor Theagarten Lingham-Soliar works at the Nelson Mandela Metropolitan University, Port Elizabeth and is an Honorary Professor of Life Sciences at the University of KwaZulu-Natal.

Market: Those in economics, especially thermodynamics, statistical mechanics, cybernetics, information theory, resource use, and evolutionary economic behavior. This book presents an innovative and challenging look at evolution on several scales, from the earth and its geology and chemistry to living organisms to social and economic systems. Applying the principles of thermodynamics and the concepts of information gathering and self- organization, the author characterizes the direction of evolution in each case as an accumulation of "distinguishability" information--a type of universal knowledge.

This book takes a new approach to the debate on causal pluralism in the philosophy of biology by asking how useful pluralism is instead of debating its truth. The core thesis in this work is that many problems do not hinge on the question of whether or not we subscribe to causal pluralism. As one step in this central argument, the author develops an account that reasonably distinguishes pluralism from monism; in another step he studies cases that allegedly motivate causal pluralism in biology. Examining these cases shows how pluralism is often irrelevant and why pursuing pluralism is sometimes dangerous, since it may generate pseudo solutions to persistent philosophical problems. This book offers a systematic approach to this subject matter and argues that we might have overestimated the significance of the monism-pluralism distinction and at the same time failed to see the risks of pursuing causal pluralism.