In July 2009, many experts in the mathematical modeling of biological sciences gathered in Les Houches for a 4-week summer school on the mechanics and physics of biological systems. The goal of the school was to present to students and researchers an integrated view of new trends and challenges in physical and mathematical aspects of biomechanics. While the scope for such a topic is very wide, they focused on problems where solid and fluid mechanics play a central role. The school covered both the general mathematical theory of mechanical biology in the context of continuum mechanics but also the specific modeling of particular systems in the biology of the cell, plants, microbes, and in physiology.
These lecture notes are organized (as was the school) around five different main topics all connected by the common theme of continuum modeling for biological systems: Bio-fluidics, Bio-gels, Bio-mechanics, Bio-membranes, and Morphogenesis. These notes are not meant as a journal review of the topic but rather as a gentle tutorial introduction to the readers who want to understand the basic problematic in modeling biological systems from a mechanics perspective.

This book is dedicated to Professor Leonid V Keldysh. His brilliant contributions to condensed matter physics include the Franz-Keldysh effect, an electron-hole liquid, the nonequilibrium (Keldysh) diagram technique, Bose-Einstein condensation (of excitons) and a metal-dielectric'' transition, acoustically-induced superlattices, multi-photon transitions and impact ionization in solids. In many respects, his work influenced and formed the paradigm of modern condensed matter physics. As a result, many famous researchers in the field have enthusiastically provided unique contributions to the book.

This science reader introduces students to the concept of heat energy. With easy-to-read text and detailed, vivid images, this book teaches students important scientific subjects and vocabulary terms like molecule, conductor, and energy. Aligned to state and national standards, the book contains nonfiction text features like an index, a glossary, captions, and bold font to keep students connected to the text. A hands-on science experiment helps students apply what they have learned and develops critical thinking skills.

Thermodynamics is fundamental to university and college curricula in chemistry, physics, engineering and many life sciences around the world. It is also notoriously difficult for students to understand, learn and apply. What makes this book different, and special, is the clarity of the text. The writing style is fluid, natural and lucid, and everything is explained in a logical and transparent manner. Thermodynamics is a deep, and important, branch of science, and this book does not make it "easy". But it does make it intelligible. This book introduces a new, 'Fourth Law' of Thermodynamics' based on the notion of Gibbs free energy, which underpins almost every application of thermodynamics and which the authors claim is worthy of recognition as a 'law'. The last four chapters bring thermodynamics into the twenty-first century, dealing with bioenergetics (how living systems capture and use free energy), macromolecule assembly (how proteins fold), and macromolecular aggregation (how, for example, virus capsids assemble). This is of great current relevance to students of biochemistry, biochemical engineering and pharmacy, and is covered in very few other texts on thermodynamics. The book also contains many novel and effective examples, such as the explanation of why friction is irreversible, the proof of the depression of the freezing point, and the explanation of the biochemical standard state.

Nonlinear Time Series Analysis with R provides a practical guide to emerging empirical techniques allowing practitioners to diagnose whether highly fluctuating and random appearing data are most likely driven by random or deterministic dynamic forces. It joins the chorus of voices recommending 'getting to know your data' as an essential preliminary evidentiary step in modelling. Time series are often highly fluctuating with a random appearance. Observed volatility is commonly attributed to exogenous random shocks to stable real-world systems. However, breakthroughs in nonlinear dynamics raise another possibility: highly complex dynamics can emerge endogenously from astoundingly parsimonious deterministic nonlinear models. Nonlinear Time Series Analysis (NLTS) is a collection of empirical tools designed to aid practitioners detect whether stochastic or deterministic dynamics most likely drive observed complexity. Practitioners become 'data detectives' accumulating hard empirical evidence supporting their modelling approach. This book is targeted to professionals and graduate students in engineering and the biophysical and social sciences. Its major objectives are to help non-mathematicians - with limited knowledge of nonlinear dynamics - to become operational in NLTS; and in this way to pave the way for NLTS to be adopted in the conventional empirical toolbox and core coursework of the targeted disciplines. Consistent with modern trends in university instruction, the book makes readers active learners with hands-on computer experiments in R code directing them through NLTS methods and helping them understand the underlying logic (please see www.marco.bittelli.com). The computer code is explained in detail so that readers can adjust it for use in their own work. The book also provides readers with an explicit framework - condensed from sound empirical practices recommended in the literature - that details a step-by-step procedure for applying NLTS in real-world data diagnostics.

This book gathers the lecture notes of courses given at the 2010 summer school in theoretical physics in Les Houches, France, Session XCIV. Written in a pedagogical style, this volume illustrates how the field of quantum gases has flourished at the interface between atomic physics and quantum optics, condensed matter physics, nuclear and high-energy physics, non-linear physics and quantum information. The physics of correlated atoms in optical lattices is covered from both theoretical and experimental perspectives, including the Bose and Fermi Hubbard models, and the description of the Mott transition. Few-body physics with cold atoms has made spectacular progress and exact solutions for 3-body and 4-body problems have been obtained. The remarkable collisional stability of weakly bound molecules is at the core of the studies of molecular BEC regimes in Fermi gases. Entanglement in quantum many-body systems is introduced and is a key issue for quantum information processing. Rapidly rotating quantum gases and optically induced gauge fields establish a remarkable connection with the fractional quantum Hall effect for electrons in semiconductors. Dipolar quantum gases with long range and anisotropic interaction lead to new quantum degenerate regimes in atoms with large magnetic moments, or electrically aligned polar molecules. Experiments with ultracold fermions show how quantum gases serve as ''quantum simulators'' of complex condensed matter systems through measurements of the equation of state. Similarly, the recent observation of Anderson localization of matter waves in a disordered optical potential makes a fruitful link with the behaviour of electrons in disordered systems.

`Non-equilibrium Thermodynamics and Statistical Mechanics: Foundations and Applications' builds from basic principles to advanced techniques, and covers the major phenomena, methods, and results of time-dependent systems. It is a pedagogic introduction, a comprehensive reference manual, and an original research monograph. Uniquely, the book treats time-dependent systems by close analogy with their static counterparts, with most of the familiar results of equilibrium thermodynamics and statistical mechanics being generalized and applied to the non-equilibrium case. The book is notable for its unified treatment of thermodynamics, hydrodynamics, stochastic processes, and statistical mechanics, for its self-contained, coherent derivation of a variety of non-equilibrium theorems, and for its quantitative tests against experimental measurements and computer simulations. Systems that evolve in time are more common than static systems, and yet until recently they lacked any over-arching theory. 'Non-equilibrium Thermodynamics and Statistical Mechanics' is unique in its unified presentation of the theory of non-equilibrium systems, which has now reached the stage of quantitative experimental and computational verification. The novel perspective and deep understanding that this book brings offers the opportunity for new direction and growth in the study of time-dependent phenomena. 'Non-equilibrium Thermodynamics and Statistical Mechanics' is an invaluable reference manual for experts already working in the field. Research scientists from different disciplines will find the overview of time-dependent systems stimulating and thought-provoking. Lecturers in physics and chemistry will be excited by many fresh ideas and topics, insightful explanations, and new approaches. Graduate students will benefit from its lucid reasoning and its coherent approach, as well as from the chem12physof mathematical techniques, derivations, and computer algorithms.

The aim of this book is to present Classical Thermodynamics in a unified way, from the most fundamental principles to non-uniform systems, thereby requiring the introduction of coarse graining methods, leading for instance to phase field methods. Solutions thermodynamics and temperature-concentration phase diagrams are covered, plus also a brief introduction to statistical thermodynamics and topological disorder. The Landau theory is included along with a general treatment of multicomponent instabilities in various types of thermodynamic applications, including phase separation and order-disorder transitions. Nucleation theory and spinodal decomposition are presented as extreme cases of a single approach involving the all-important role of fluctuations.In this way, it is hoped that this coverage will reconcile in a unified manner techniques generally presented separately in physics and materials texts.

This multi-volume handbook is the most up-to-date and comprehensive reference work in the field of fractional calculus and its numerous applications. This fifth volume collects authoritative chapters covering several applications of fractional calculus in physics, including electrodynamics, statistical physics and physical kinetics, and quantum theory.

This volume is the third edition of the first-ever elementary book on the Langevin equation method for the solution of problems involving the translational and rotational Brownian motion of particles and spins in a potential highlighting modern applications in physics, chemistry, electrical engineering, and so on. In order to improve the presentation, to accommodate all the new developments, and to appeal to the specialized interests of the various communities involved, the book has been extensively rewritten and a very large amount of new material has been added. This has been done in order to present a comprehensive overview of the subject emphasizing via a synergetic approach that seemingly unrelated physical problems involving random noise may be described using virtually identical mathematical methods in the spirit of the founders of the subject, viz., Einstein, Langevin, Smoluchowski, Kramers, etc. The book has been written in such a way that all the material should be accessible both to an advanced researcher and a beginning graduate student. It draws together, in a coherent fashion, a variety of results which have hitherto been available only in the form of scattered research papers and review articles.

Natural phenomena consist of simultaneously occurring transport processes and chemical reactions. These processes may interact with each other and may lead to self-organized structures, fluctuations, instabilities, and evolutionary systems. "Nonequilibrium Thermodynamics, 3rd edition" emphasizes the unifying role of thermodynamics in analyzing the natural phenomena.

This third edition updates and expands on the first and second editions by focusing on the general balance equations for coupled processes of physical, chemical, and biological systems. The new edition contains a new chapter on stochastic approaches to include the statistical thermodynamics, mesoscopic nonequilibrium thermodynamics, fluctuation theory, information theory, and modeling the coupled biochemical systems in thermodynamic analysis. This new addition also comes with more examples and practice problems.

A useful text for seniors and graduate students from diverse engineering and science programs to analyze some nonequilibrium, coupled, evolutionary, stochastic, and dissipative processesHighlights fundamentals of equilibrium thermodynamics, transport processes and chemical reactionsExpands the theory of nonequilibrium thermodynamics and its use in coupled transport processes and chemical reactions in physical, chemical, and biological systemsPresents a unified analysis for transport and rate processes in various time and space scalesDiscusses stochastic approaches in thermodynamic analysis including fluctuation and information theoriesHas 198 fully solved examples and 287 practice problemsAn Instructor Resource containing the Solution Manual can be obtained from the author: [email protected]

This book presents the statistical theory of complex wave scattering and quantum transport in physical systems which have chaotic classical dynamics, as in the case of microwave cavities and quantum dots, or which possess quenched randomness, as in the case of disordered conductors - with an emphasis on mesoscopic fluctuations. The statistical regularity of the phenomena is revealed in a natural way by adopting a novel maximum-entropy approach. Shannon's information entropy is maximised, subject to the symmetries and constraints which are physically relevant, within the powerful and non-perturbative theory of random matrices; this is a most distinctive feature of the book. Aiming for a self-contained presentation, the quantum theory of scattering, set in the context of quasi-one-dimensional, multichannel systems, and related directly to scattering problems in mesoscopic physics, is introduced in chapters two and three. The linear-response theory of quantum electronic transport, adapted to the context of mesoscopic systems, is discussed in chapter four. These chapters, together with chapter five on the maximum-entropy approach and chapter eight on weak localization, have been written in a most pedagogical style, suitable for use on graduate courses. In chapters six and seven, the problem of electronic transport through classically chaotic cavities and quasi-one-dimensional disordered systems is discussed. Many exercises are included, most of which are worked through in detail, aiding graduate students, teachers, and research scholars interested in the subject of quantum transport through disordered and chaotic systems.