M icrobial biotechnology is an important area that promotes advanced research into using microbes for value-added products, human nutrition, and the overall wellbeing of society. This book presents the latest information on the use of microbes for sustainable development, and highlights state-of-the-art biotechnological techniques used to harness microbial biotechnological traits on a commercial scale. Gathering contributions from authoritative researchers in the field, it addresses recent advances in microbial biotechnological approaches that offer sustainable options for future generations. Exploring a broad range of microbial products and their uses, the book specifically places emphasis on the application of microorganisms in healthcare, the environment and industry. It also discusses various compound classes derived from microbial metabolites. Pursuing a holistic approach to recent advances in the utilization of various microbes as biotechnological tools, the book also covers traditional uses, and explores emerging strategies to harness their full potential. Accordingly, it offers a valuable resource for researchers and graduate students alike.

This book provides an authoritative overview of emerging pollutants in sewage sludge and soils. It traces the latest research and new trends on the characterization, removal and treatment of such pollutants in urban and industrial sewage sludge and soils. The book covers topics such as antibiotic resistance, fate and environmental impact of contaminants of emerging concern, environmental transmission of human pathogenic viruses and their effect on soil, and the repercussion of various emerging pollutants on biodiversity. It also offers a case study of the epidemiology-based surveillance of SARS-CoV-2 in wastewater and sludge. The book appeals not only to researchers and professionals working with emerging contaminants, but also to policy makers and a broader audience interested in learning more about the effects of these contaminants in human and environmental health.

Investigations on various aspects of plant-pathogen interactions have the ultimate aim of providing information that may be useful for the development of effective crop disease management systems. Molecular techniques have accelerated the formulation of short- and long-term strategies of disease management. Exclusion and eradication of plant pathogens by rapid and precise detection and identification of microbial pathogens in symptomatic and asymptomatic plants and planting materials by employing molecular methods has been practiced extensively by quarantines and certification programs with a decisive advantage. Identification of sources of resistance genes, cloning and characterization of desired resistance genes and incorporation of resistance gene(s) into cultivars and transformation of plants with selected gene(s) have been successfully performed by applying appropriate molecular techniques. Induction of resistance in susceptible cultivars by using biotic and abiotic inducers of resistance is a practical proposition for several crops whose resistance levels could not be improved by breeding or transformation procedures. The risks of emergence of pathogen strains less sensitive or resistant to chemicals have been reduced appreciably by rapid identification of resistant strains and monitoring the occurrence of such strains in different geographical locations.

There is a growing global awareness of the link between good diet and health. This fascinating book reviews various functional foods or nutraceuticals and the bio-active compounds they contain in order to identify the role of bioactive compounds such as nisin, micronutrients, and hydrocolloids in the diet in overall human health. It also provides up-to-date information on functional elements like antioxidants, dietary fibres, pre & probiotics, vitamins and mineral-enriched foods in the human diet. Consisting of fifteen chapters, the book offers a systematic review of the key factors in the preparation of functional foods from selected sources, and also describes the processing, preservation and packaging of a range of functional food products. This book is a valuable resource for students and researchers working in the field of food science, food technology, and nutrition, as well as for industry experts.

Providing specific knowledge in the theory of image analysis, optics, fluorescence, and imaging devices in biomedical laboratories, this timely and indispensable volume focuses on the theory and applications of detection, morphometry, and motility measurement techniques applied to bacteria, fungi, yeasts and protozoa.

This volume discusses the oral microbiome, and oral and systemic health. The chapters in this book cover topics such as analytical techniques for identifying and measuring oral bacteria; strategies for controlling common sources of variability in oral microbiome methods for viral bacterial and fungal analysis; ways to study oral DNA and RNA samples to identify molecular pathways to disease; approaches to functional assays for oral bacteriophage, antibiotic purging of systemic bacteria; and metaproteomic analysis of various oral samples. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and practical, The Oral Microbiome: Methods and Protocols is a valuable resource for any scientist or researcher looking to further study this exciting and developing field.

Studies on the phenomenon of plant pathogenesis (disease development) have been useful to have a deep insight into the interactions between host plant and the pathogen. Depending on the levels of susceptibility (compatibility) or resistance (incompatibility) of the host plant and virulence of the pathogen, disease development may progress, either leading to symptom expression or result in the suppression of pathogen proliferation. Molecular techniques have been applied to elucidate the nature of interactions between the gene products of the plant and pathogen at cellular and molecular levels. Successful evasion of hosta (TM)s surveillance system and subsequent activities of metabolites of the pathogen (enzymes and toxins) encoded by pathogen genes counteracting the effects of various defense-related antimicrobial compounds present already or produced by the host plants, after initiation of infection have been critically studied by applying various molecular techniques. In addition to studying various phases of disease development in individual plants, molecular methods have been demonstrated to be effective, in gathering data on various aspects of epidemiology under natural conditions where the interaction of pathogen with populations of plants is influenced significantly by the environmental conditions existing in different ecosystems. This volume focuses on the possibility of applying the knowledge on pathogenesis and molecular epidemiology to determine the vulnerable stages in the life cycles of the pathogens that can be disrupted to achieve more effective disease control.

This book describes the accomplishments of a curious and imaginative scientist, and his endeavours to translate or even to extrapolate scientific insights into the world of art.The science section in this volume concerns studies on S-layers, a very important class of proteins found on the surface of numerous Bacteria and nearly all Archaea. S-layer proteins are one of the most abundant biopolymers on our planet, and assemble into the simplest type of biological membrane. Moreover, they are unique building blocks and patterning elements for the production of complex supramolecular structures and nanoscale devices in nanobiotechnology, molecular nanotechnology, synthetic biology, biomimetics and nanomedicine.In the second part of this book the author goes on to passionately describe how his scientific activities stimulated his art work, which in particular concerns the visualization of results and the potential of synthetic biology and evolutionary events induced by genetic manipulations. Most importantly, the engagement in art allowed him to leave the rather curtailed canon of science and reach a mental state of unlimited freedom of thoughts. Mask-like sculptures are used as examples to visualize the intersection between science and art, and in particular the unpredictability and mystery of scientific visions.

This book includes papers from keynote lecture and oral presentations of Plant and Microbe Adaptations to Cold (PMAC) 2012, an international conference on winter hardiness of crop and pathogenic microbes. The PMAC has been started in 1997 in Japan as an interdisciplinary forum for scientists and extension people working in the field in plant pathology, plant physiology, microbiology, and crop breeding to increase our knowledge and improve our understanding of overwintering of crops, forages and grasses and solve the problems associated with losses due to freezing and heavy snow cover. Successive meetings have been held in Iceland (2000), Canada (2003), Italy (2006), and Norway (2009). PMAC2012 will be a special meeting with a focus on global climate change, food security and agriculture sustainability and the whole program will be arranged to reflect this theme. The topics covered by this proceedings includes, global warming in agricultural environment, plant adaptations to cold, microbial adaptations to cold, plant-microbe interaction under cold, and molecular breeding for winter hardiness. The researches range from molecular biology to ecology and breeding. Experts in the field will report cutting edge research and thoughtful strategies for sustainability.

Studies on molecular biology of pathogens, infection process and disease resistance, have provided information essentially required to understand the vulnerable stages at which the pathogens can be tackled effectively and to adopt novel strategies to incorporate disease resistance genes from diverse sources and /or to induce resistance of cultivars with desirable agronomic attributes using biotic or abiotic agents. The nature of interaction between the gene products of the pathogen and plant appears to determine the outcome of the interaction resulting in either disease progression or suppression. Transgenic plants with engineered genes show promise for effective exploitation of this approach for practical application. Research efforts during the recent years to sequence the whole genomes of the pathogens and plants may lead to development of better ways of manipulating disease resistance mechanisms enabling the grower to achieve higher production levels and the consumer to enjoy safer food and agricultural products. Experimental protocols included in appropriate chapters will be useful for researchers and graduate students.

Extremely diverse and complicated bacterial and protozoan populations inhabit the rumen and intestinal tract of animals, and there is a delicate balance among the individual populations within this complex microbial community. This authoritative edited volume, the first in a two-volume set, reviews the gut environment and the fermentations taking place in animal digestive tracts. It is an essential source of reference for microbial ecologists and physiologists, medical microbiologists and gastroenterologists, biochemists, nutritionists, veterinarians and animal scientists, and wildlife ecologists.

Virus as Populations: Composition, Complexity, Dynamics, and Biological Implications explains fundamental concepts that arise from regarding viruses as complex populations when replicating in infected hosts. Fundamental phenomena in virus behavior, such as adaptation to changing environments, capacity to produce disease, probability to be transmitted or response to treatment, depend on virus population numbers and in the variations of such population numbers. Concepts such as quasispecies dynamics, mutations rates, viral fitness, the effect of bottleneck events, population numbers in virus transmission and disease emergence, new antiviral strategies such as lethal mutagenesis, and extensions of population heterogeneity to nonviral systems are included. These main concepts of the book are framed in recent observations on general virus diversity derived from metagenomic studies, and current views on the origin of viruses and the role of viruses in the evolution of the biosphere.

The nitrogen (N) cycle is one of the most important nutrient cycles on the planet, and many of its steps are performed by microbial organisms. During the cycling process, greenhouse gases are formed, including nitrous oxide and methane. In addition, the use of nitrogen fertilizers increases freshwater nitrate levels, causing pollution and human health problems. A greater knowledge of the microbial communities involved in nitrogen transformations is necessary to understand and counteract nitrogen pollution. This book - written by renowned researchers who are specialized in the most relevant and emerging topics in the field - provides comprehensive information on the new theoretical, methodological, and applied aspects of metagenomics and other 'omics' approaches used to study the microbial N cycle. The book provides a thorough account of the contributions of metagenomics to microbial N cycle background theory. It also reviews state-of-the-art investigative methods and explores new applications in water treatment, agricultural practices, climate change, among others. The book is recommended for microbiologists, environmental scientists, and anyone interested in microbial communities, metagenomics, metatranscriptomics, and metaproteomics of the microbial N cycle.

Advances in geomicrobiology have progressed at an accelerated pace in recent years. Ehrlich's Geomicrobiology, Sixth Edition surveys various aspects of the field, including the microbial role in elemental cycling and in the formation and degradation of minerals and fossil fuels. Unlike the fifth edition, the sixth includes many expert contributors besides the editors, providing added depth to each topic and broadening this edition's overall insight into geomicrobiology. The Sixth Edition Includes: Extensive revisions and updates to most chapters from the fifth edition A new chapter on terrestrial subsurface ecosystems A new chapter summarizing important principles of geomicrobiology New discussions and references on the latest findings and theories in geomicrobiology Through revisions, updates, and the introduction of new authors who are specialists on the topics covered, this new edition is the most in-depth and current overview of geomicrobiology. The research presented has applications in agriculture, forestry, aquaculture, marine science, the metals industry, and more. The new breadth and scope as well as the current and developing applications which this book addresses make it a must-have source in geomicrobiology.

Biodiversity of Microbial Life places the importance and novelty of the diversity of the microbial world in perspective with the biodiversity of plants and animals. Microbial diversity has driven the evolution of all life on Earth as well as the nutrient cycles, which are key to the operation of the biosphere. Microorganisms live in all ecosystems, even extreme environments not habitable to other organisms. Noted experts including Carl Woese, the originator of the Tree of Life, and Rita Colwell, who is now Director of the National Science Foundation, offer their unique perspectives on the extent and importance of microbial biodiversity. Special emphasis is placed on:

• Evolution, speciation, and contrasts between microbial biodiversity and plant and animal biodiversity
• Physiological and metabolic diversity of microorganisms
• Biodiversity of microbial life in terrestrial and marine environments
• Symbioses between microorganisms and plants, insects, and humans
• Extreme environments populated exclusively or primarily by microorganisms including thermal vents and hot springs, polar sea ice environments, and subterranean ecosystems
• Microorganisms and biotechnology

Biodiversity of Microbial Life is an essential resource for all biologists interested in biodiversity.

The second edition of the book begins with the description of the diversity of wine-related microorganisms, followed by an outline of their primary and energy metabolism. Subsequently, important aspects of the secondary metabolism are dealt with, since these activities have an impact on wine quality and off-flavour formation. Then chapters about stimulating and inhibitory growth factors follow. This knowledge is helpful for the growth management of different microbial species. The next chapters focus on the application of the consolidated findings of molecular biology and regulation the functioning of regulatory cellular networks, leading to a better understanding of the phenotypic behaviour of the microbes in general and especially of the starter cultures as well as of stimulatory and inhibitory cell-cell interactions during wine making. In the last part of the book, a compilation of modern methods complete the understanding of microbial processes during the conversion of must to wine.This broad range of topics about the biology of the microbes involved in the vinification process could be provided in one book only because of the input of many experts from different wine-growing countries.

This collection of essays discusses fascinating aspects of the concept that microbes are at the root of all ecosystems. The content is divided into seven parts, the first of those emphasizes that microbes not only were the starting point, but sustain the rest of the biosphere and shows how life evolves through a perpetual struggle for habitats and niches. Part II explains the ways in which microbial life persists in some of the most extreme environments, while Part III presents our understanding of the core aspects of microbial metabolism. Part IV examines the duality of the microbial world, acknowledging that life exists as a balance between certain processes that we perceive as being environmentally supportive and others that seem environmentally destructive. In turn, Part V discusses basic aspects of microbial symbioses, including interactions with other microorganisms, plants and animals. The concept of microbial symbiosis as a driving force in evolution is covered in Part VI. In closing, Part VII explores the adventure of microbiological research, including some reminiscences from and perspectives on the lives and careers of microbe hunters. Given its mixture of science and philosophy, the book will appeal to scientists and advanced students of microbiology, evolution and ecology alike.

This volume details the exploration, collection, characterization, evaluation and conservation of microbes for sustainable utilization in the development of the global as well as national economies, e.g. in agriculture, ecosystems, environments, industry and medicine.Many research institutes and universities all over the world carry out microbiological and biotechnological research, which generates substantial genomic resources such as cDNA libraries, gene constructs, promoter regions, transgenes and more valuable assets for gene discovery and transgenic product development. This work provides up-to-date information on the management of microbial resources in the environment. It also covers the ecology of microorganisms in natural and engineered environments. In trying to understand microbial interactions it further focuses on genomic, metagenomic and molecular advances, as well as on microbial diversity and phylogeny; ecological studies of human, animal and plant microbiology and disease; microbial processes and interactions in the environment; and key technological advances. Though not intended to serve as an encyclopedic review of the subject, the various chapters investigate both theoretical and practical aspects and provide essential basic information for future research to support continued development. "

This book covers innovations in starter culture, production of health beneficial fermented food products, technological intervention in beer, wine and spirits production, marketing of alcoholic beverages, modernization of dairy plants for production of fermented dairy products, non-diary probiotics, development of automatic fermenters, and packaging technology. Furthermore, it includes genetic engineering for improved production and quality improvement of food and beverages, which allows forecasting of the quality of the final product. Specifically this includes applications of hybrid methods combining multivariate statistics and computational intelligence, the role of consumers in innovation of novel food and beverages, and IPRS in respect to food and beverages. Innovations in Technologies for Fermented Food and Beverage Industries is a resource for students, researchers, professionals in the industry, as well as governments in their efforts to adopt technologies of their interest.

This volume presents a compilation of various representative techniques and approaches currently used to study bacterial foodborne pathogens. Chapters guide the reader through bacterial pathogen detection and quantification in food, molecular, phenotypic, metabolic characterization of food pathogens, and ecology of foodborne bacterial pathogens. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Foodborne Bacterial Pathogens : Methods and Protocols aims to server as a guide both for researchers, students, and those in the food industry who want to have an overview of current approaches and protocols used to study bacterial foodborne pathogens.

Morphological, biological, biochemical and physiological characteristics have been used for the detection, identification and differentiation of fungal pathogens up to species level. Tests based on biological characteristics are less consistent. Immunoassays have been shown to be effective in detecting fungal pathogens present in plants and environmental samples. Development of monoclonal antibody technology has greatly enhanced the sensitivity and specificity of detection, identification and differentiation of fungal species and varieties/strains. Nucleic acid-based techniques involving hybridization with or amplification of unique DNA have provided results rapidly and reliably. Presentation of a large number of protocols is a unique feature of this volume.

This book is divided into three thematic areas. The first covers a revision of the taxonomy of algae, based on the algae portal, as well as the general aspects of biology and the methodologies used in this branch of marine biology. The second subject area focuses on the use of algae in environmental assessment, with an intensive implementation in Western economies and some emerging economies. The third topic is the potential use of algae in various industries including food, pharmaceuticals, cosmetics, agricultural fertilizers, and the emerging biofuels industries.