Systematic biology has a far wider application than merely the provision of a reliable classification scheme for new strains. With the framework of the hierarchic system stabilizing, genomes, noncoding regions, and genes and their products can now be evaluated in an evolutionary context. This book summarizes recent developments in the molecular characterization of cultured and as-yet uncultured prokaryotes, emphasizing the strengths and weaknesses of individual approaches. The chapters of the book are compiled to stimulate students to enter the field of bacterial diversity, presenting a broad spectrum of fascinating multifaceted disciplines that illuminate the paths to ecosystem functioning, communication within communities, symbiosis, life in extreme environments, astrobiology, and more.

Phosphorus (P) is a finite resource which is essential for life. It is a limiting nutrient in many ecosystems but also a pollutant which can affect biodiversity in terrestrial ecosystems and change the ecology of water bodies. This book collects the latest information on biological processes in soil P cycling, which to date have remained much less understood than physico-chemical processes. The methods section presents spectroscopic techniques and the characterization of microbial P forms, as well as the use of tracers, molecular approaches and modeling of soil-plant systems. The section on processes deals with mycorrhizal symbioses, microbial P solubilization, soil macrofauna, phosphatase enzymes and rhizosphere processes. On the system level, P cycling is examined for grasslands, arctic and alpine soils, forest plantations, tropical forests, and dryland regions. Further, P management with respect to animal production and cropping, and the interactions between global change and P cycling, are treated.

Biomining is the use of microorganisms in the recovery of metals from ores. During bioleaching, metals such as copper, nickel or zinc are oxidized through microbial action from the water-insoluble sulfide to the soluble sulfate forms. Although gold is inert to microbial action, microbes can also be used in gold recovery from certain types of ores because as they oxidize the ore, they open up its structure, thereby allowing a gold-solubilizing agent such as cyanide to penetrate the ore. The book describes several industrial bioleaching and biooxidation processes as well as the underlying theory and biology of the microbes involved.

Jointly published with INRA, Paris.
The application of new production methods in the food industry - genetic engineering in plants and animals - as well as recent crises over food-borne diseases have led consumers to a growing concern about science as an appropriate basis for developing sound agricultural policies. This book presents the discussion of scientists and politicians in the framework of an OECD programme conference on how to restore public trust in the application of new scientific achievements concerning food production.

This book is designed to be a long term career reference. The chapters present modern procedures. This is a how-to-book with a difference. These chapters:
- reveal the background information about working with salt loving organisms,
- are loaded with information about how experiments are conducted under high salt,
- provide information about analyses that work under these conditions and those that may not,
- present a wide range of details from laboratory designs to equipment used and even to simple anecdotal hints that can only come from experience.
Microbiological training focuses largely on the growth, the handling and the study of the microbes associated with humans and animals. Yet the largest proportion of the Earth s microbiota lives in saline environments such as the Oceans, saline deserts and terminal hypersaline environments. This need for salt can be intimidating for those interested in entering the field or for those interested in understanding how such research is accomplished."

Predictive microbiology is a recent area within food microbiology, which studies the responses of microorganisms in foods to environmental factors (e.g., temperature, pH) through mathematical functions. These functions enable scientists to predict the behavior of pathogens and spoilage microorganisms under different combinations of factors. The main goal of predictive models in food science is to assure both food safety and food quality. Predictive models in foods have developed significantly in the last 20 years due to the emergence of powerful computational resources and sophisticated statistical packages. This book presents the concepts, models, most significant advances, and future trends in predictive microbiology. It will discuss the history and basic concepts of predictive microbiology. The most frequently used models will be explained, and the most significant software and databases (e.g., Combase, Sym'Previus) will be reviewed. Quantitative Risk Assessment, which uses predictive modeling to account for the transmission of foodborne pathogens across the food chain, will also be covered.

For centuries man has treated food to prolong its edible life, and nowadays both traditional and modern preservatives are used widely to ensure the satisfactory maintenance of quality and safety of foods. There continues to be increased public concern about the use of food additives, including preservatives, resulting from a perception that some of them may have deleterious effects on health. However, as eating habits have changed with an emphasis on what has been popularly termed a `healthy diet', there is at the same time a concern that reduction in preservative usage could lead to loss of safety and protection from food poisoning. While some preservatives are coming under increasing regulatory pressure others, particularly more natural ones, are receiving increased attention and gaining in importance and acceptability. This book supports the continued safe and effective use of preservatives within these current constraints. It therefore gives detailed information on the practical use of the major antimicrobial preservatives. Uniquely, it couples this with current understanding of their modes of action, at the levels of cellular physiology and biochemistry, in such a way as to provide a sound scientific basis for their efficacy. Such an approach also encourages the future logical development and use of preservatives.

The field of bacterial genetics has been restricted for many years to Escherichia coli and a few other genera of aerobic or facultatively anaerobic bacteria such as Pseudomonas, Bacillus, and Salmonella. The prevailing view up to recent times has been that anaerobic bacteria are interesting organisms but nothing is known about their genetics. To most microbiologists, anaerobic bacteria appeared as a sort of distant domain, reserved for occasional intrusions by taxonomists and medical microbiologists. By the mid-1970s, knowledge of the genetics and molecular biology of anaerobes began to emerge, and then developed rapidly. but also im This was the result of advances in molecular biology techniques, portantly because of improvements in basic techniques for culturing anaerobes and for understanding their biochemistry and other areas of in terest. Investigations in this field were also stimulated by a renewal of interest in their ecology, their role in pathology and in biotransformations, and in the search for alternative renewable sources of energy. The initial idea for this book came from Thomas D. Brock. When Dr. Brock requested my opinion about two years ago on the feasibility of publishing a book on the genetics of anaerobic bacteria, as a part of the Brock/Springer Series in Contemporary Bioscience, I answered positively but I was apprehen sive about assuming the role of editor. However, I was soon reassured by the enthusiastic commitment of those I approached to contribute. Eventually, thanks to the caring cooperation of the contributors, the task became relatively easy.

Bioremediation of organic pollutants and heavy metals by use of microorganisms represents a safe, inexpensive, and environmentally-friendly concept in modern environmental engineering. During the last three decades intense efforts have been made by microbiologists and environmental engineers in the isolation and characterization of microorganisms capable of degradation, transformation and detoxification of recalcitrant chemical compounds of environmental concern: (polyhalogenated) dibenzo-p-dioxins, dibenzofurans, and diphenyl ethers. Special emphasis is placed on the potential of molecular biology techniques to improve presently available biocatalysts.

Molecular research on algae over the last decades has provided significant insights into universal biological mechanisms. This knowledge has proved essential to the field of biotechnology where research on new applications in food culture, biofuel and pharmaceuticals is underway. This new book on algal cell biology provides an overview of cutting-edge research with a focus on cytoskeleton structure/function and cytokinesis of algae.

CRISPR/Cas is a recently described defense system that protects bacteria and archaea against invasion by mobile genetic elements such as viruses and plasmids. A wide spectrum of distinct CRISPR/Cas systems has been identified in at least half of the available prokaryotic genomes. On-going structural and functional analyses have resulted in a far greater insight into the functions and possible applications of these systems, although many secrets remain to be discovered.

In this book, experts summarize the state of the art in this exciting field.

In March 1996 the Society of Experimental Biology (UK) together with two other international scientific societies, the Australian and New Zealand Society for Comparative Physiology and Biochemistry and the Society for Integrative and Comparative Biology (formally the American Society for Zoology) joined forces with Springer-Verlag, Heidelberg to produce one of the first fully electronic online, peer-reviewed biological journals, Experimental Biology Online. The present product represents the fruits of this joint venture and encapsulates Volumes 1 and 2 of the journal. This will be an ongoing series such that an archival version of the journal will be available to all libraries as well as the on-line version. At the outset this was "new land" for all concerned but the launching of a journal which would cover experimental biology in terms of Animal, Cell and Plant topics was daunting but we all felt that the use of electronic media and the internet would be ideally suited to this purpose.

Though cholera is an ancient disease, its perennial occurrence in several parts of the world has attracted many researches to find ways and means to combat the disease. The prevailing seventh pandemic cholera is dominating since 1961, but the dimension of the disease has taken several silhouettes, as the genetic structure and functions of the Vibrio cholerae has changed to a great extent. Several recent studies have shown that transformation of the pathogen at the molecular level has ameliorated several cholera outbreaks and epidemics of with successive new clones of V. cholerae. This comprehensive compilation, written by eminent international researchers reviews the epidemiology of cholera in Africa, Asia, Russia and Latin Americas. The other chapters contributed by acclaimed authors cover various aspects on evolution, polysaccaharide biosynthesis, SXT element, integrons, small molecule signalling systems, flagellar synthesis, filamentous phages, pathogenic role of proteases and hemolysin, and other putative virulence factors. In addition, ecology of V. cholerae and management of cholera were also discussed in detail. This book will be good source of information to all researchers with interests in infectious diseases, microbiology and molecular biology.

"Laboratory Protocols in Fungal Biology" presents the latest techniques in fungal biology. This book analyzes information derived through real experiments, and focuses on cutting edge techniques in the field. The book comprises 57 chapters contributed from internationally recognised scientists and researchers. Experts in the field have provided up-to-date protocols covering a range of frequently used methods in fungal biology. Almost all important methods available in the area of fungal biology viz. taxonomic keys in fungi; histopathological and microscopy techniques; proteomics methods; genomics methods; industrial applications and related techniques; and bioinformatics tools in fungi are covered and complied in one book. Chapters include introductions to their respective topics, list of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting. Each chapter is self-contained and written in a style that enables the reader to progress from elementary concepts to advanced research techniques. "Laboratory Protocols in Fungal Biology" is a valuable tool for both beginner research workers and experienced professionals.

Coming Soon in the "Fungal Biology" series:

Goyal, Manoharachary / "Future Challenges in Crop Protection Against Fungal Pathogens"

Martin, Garcia-Estrada, Zeilinger / "Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites"

Zeilinger, Martin, Garcia-Estrada / "Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites, Volume 2"

van den Berg, Maruthachalam / "Genetic Transformation Systems in Fungi"

Schmoll, Dattenbock / "Gene Expression Systems in Fungi"

Dahms / "Advanced Microscopy in Mycology ""

Microbiology has undergone a number of metamorphoses in its relatively brief existence. It has been in approximate succession, morphology, epidemiology, biochemistry, genetics, and molecular biology. It is also becoming a significant parcel of cell surface studies. The one embodiment which has remained elusiv- particularly for bacteriology - is the taxonomic one. This may have been a blessing in disguise because it encouraged microbiologists to deal with the general rather than the particular; promoting a search for unitary explanations, in the manner of Kluyver and van Niel, long before anyone knew about the universality of the genetic code, or could trace the genealogy of enzymes from the study of amino acid substitutions. . This volume is predicated on the idea that deep analogies underly the mech anisms of cellular interaction, and therefore belongs in the unitary tradition of microbiology. It occupies itself with a wide variety of micro-organisms, considering them from vantage points of considerable diversity, ranging from taxonomic irreverence to keen evolutionary awareness, and is concerned with areas which have developed independently of each other."

It has been clear for a long time that after transplantation of a lymphoid organ, hematopoietic stem cells can regenerate the compartments of the organ, provided that the rest of its architecture - the strome, the epithelia and the vessels - is intact. Ahead lies the even greater challenge to assemble also these other architectural elements of a lymphoid organ by transplanting stem cells. The workshop on lymphoid organogenesis was convened to review current knowledge of and experimental skills involved in this grand project to build a lymphoid organ from its individual cellular components.

Electron microscopy is frequently portrayed as a discipline that stands alone, separated from molecular biology, light microscopy, physiology, and biochemistry, among other disciplines. It is also presented as a technically demanding discipline operating largely in the sphere of "black boxes" and governed by many absolute laws of procedure. At the introductory level, this portrayal does the discipline and the student a disservice. The instrumentation we use is complex, but ultimately understandable and, more importantly, repairable. The procedures we employ for preparing tissues and cells are not totally understood, but enough information is available to allow investigators to make reasonable choices concerning the best techniques to apply to their parti cular problems. There are countless specialized techniques in the field of electron and light microscopy that require the acquisition of specialized knowledge, particularly for interpretation of results (electron tomography and energy dispersive spectroscopy immediately come to mind), but most laboratories possessing the equipment to effect these approaches have specialists to help the casual user. The advent of computer operated electron microscopes has also broadened access to these instruments, allowing users with little technical knowledge about electron microscope design to quickly become operators. This has been a welcome advance, because earlier instru ments required a level of knowledge about electron optics and vacuum systems to produce optimal photographs and to avoid "crashing" the instruments that typically made it difficult for beginners.

This new edition of Fungal Associations focuses on mycorrhizas, lichens and fungal-bacterial symbioses. It has been completely revised, updated and expanded. Renowned experts present thorough reviews and discuss the most recent findings on molecular interactions between fungi and plants or bacteria that lead to morphological alterations and novel properties in the symbionts. New insights into the beneficial impact of fungal associations on ecosystem health are provided and documented with striking examples.

Research in Antarctica in the past two decades has fundamentally changed our perceptions of the southern continent. This volume describes typical terrestrial environments of the maritime and continental Antarctic. Life and chemical processes are restricted to small ranges of ambient temperature, availability of water and nutrients. This is reflected not only in life processes, but also in those of weathering and pedogenesis. The volume focuses on interactions between plants, animals and soils. It includes aspects of climate change, soil development and biology, as well as above- and below-ground results of interdisciplinary research projects combining data from botany, zoology, microbiology, pedology, and soil ecology.

Severe Infections Caused by Pseudomonas aeruginosa emphasizes controversies worldwide in the diagnosis, treatment, prevention and pathogenesis of pseudomonas aeruginosa infections. By including both chapters written by European authors and chapters written by North American experts, the reader is ensured of receiving a broad spectrum of opinions on controversial topics. Special attention is paid to such topics as the diagnosis of hospital-acquired pneumonia caused by p. aeruginosa, scheduled antibiotic therapy for patients with cystic fibrosis, empiric therapy for febrile neurotropenic patients, combination vs. single agent antibiotic therapy for severely ill patients, and alternatives to conventional antibiotic therapies.

This excellent overview of our current understanding of pseudomonas aeruginosa pathogenesis will prove useful to clinicians and microbiologists around the globe.

Egg Parasitoids in Agroecosystems with emphasis on Trichogramma was conceived to help in the promotion of biological control through egg parasitoids by providing both basic and applied information. The book has a series of chapters dedicated to the understanding of egg parasitoid taxonomy, development, nutrition and reproduction, host recognition and utilization, and their distribution and host associations. There are also several chapters focusing on the mass production and commercialization of egg parasitoids for biological control, addressing important issues such as parasitoid quality control, the risk assessment of egg parasitoids to non-target species, the use of egg parasitoids in integrated pest management programs and the impact of GMO on these natural enemies. Chapters provide an in depth analysis of the literature available, are richly illustrated, and propose future trends.

The localized attachment of circulating leukocytes to endothelium has been recognized as the cellular hallmark of the inflammatory response. This adhesive interaction, a necessary antecedent to the emigration of leukocytes from the blood into the tissues, is mediated by vascular adhesion molecules. Leukocyte Recruitment, Endothelial Cell Adhesion Molecules and Transcriptional Control: Insights for Drug Discovery outlines some of the cellular and molecular mechanisms of inflammation with contributions from top researchers. This volume provides an overview of three of these endothelial adhesion molecules, as examples of key mediators of leukocyte recruitment. It reviews the structure and regulation of these cell surface proteins and focus on the rapidly expanding field of transcriptional regulation of these inducible proteins, and closes with a discussion of drug discovery possibilities that target the regulation of leukocyte recruitment. This book will be of interest for any researchers, in academia or industry, looking for an overview of leukocyte recruitment or novel approaches to drug discovery.

In this book, outstanding researchers from the US and Japan review recent progress in Epstein-Barr virus research. Most people carry EBV in memory B-cells in a latent stage. Many malignancies such as T/NK cell lymphoma, AIDS-associated B-cell lymphoma, gastric carcinoma and Hodgkin's disease have been causally linked to EBV. The development of molecular biology technique has allowed us to study the roles of individual EBV genes that act in the maintenance and disruption of EBV latency.

Biosurfactants, tensio-active compounds produced by living cells, are now gaining increasing interest due to their potential applications in many different industrial areas in which to date almost exclusively synthetic surfactants have been used. Their unique structures and characteristics are just starting to be appreciated. In addition, biosurfactants are considered to be environmentally "friendly," relatively non-toxic and biodegradable. This Microbiology Monographs volume deals with the most recent advances in the field of microbial biosurfactants, such as rhamnolipids, serrawettins, trehalolipids, mannosylerythritol lipids, sophorolipids, surfactin and other lipopeptides. Each chapter reviews the characteristics of an individual biosurfactant including the physicochemical properties, the chemical structures, the role in the physiology of the producing microbes, the biosynthetic pathways, the genetic regulation, and the potential biotechnological applications.