The methods included in Environmental Microbiology: Methods and Pro- cols can be placed in the categories "Communities and Biofilms," "Fermented Milks," "Recovery and Determination of Nucleic Acids," and the review s- tion, containing chapters on the endophytic bacterium, Bacillus mojavensis, the engineering of bacteria to enhance their ability to carry out bioremediation of aromatic compounds, using the hemoglobin gene from a strain of Vitreoscilla 23 spp., and the use of chemical shift reagents and Na NMR to study sodium gradients in microorganisms, all of which should be of interest to investigators in these fields. The subjects treated within the different categories also cover a wide range, with methods ranging from those for the study of marine organisms, through those for the investigation of microorganisms occurring in ground waters, including subsurface ground waters, to other types of environmental waters, to as varied subjects as the biodiversity of yeasts found in northwest Argentina. The range of topics described in the Fermented Milks section is smaller, but significant for investigators in areas concerned with milk as an item of foods for infants, small children, and even adults.

Biological remediation methods have been successfully used to treat polluted soils. While bacteria have produced good results in bioremediation for quite some time now, the use of fungi to decontaminate soils has only recently been established.

This volume of Soil Biology discusses the potentials of filamentous fungi in bioremediation. Fungi suitable for degradation, as well as genetically modified organisms, their biochemistry, enzymology, and practical applications are described. Chapters include topics such as pesticide removal, fungal wood decay processes, remediation of soils contaminated with heavy and radioactive metals, of paper and cardboard industrial wastes, and of petroleum pollutants.

A Guide to the World of the Yeasts J. F. T. Spencer and D. M. Spencert As the well-known authority on yeasts, the late Professor Rose, frequently pointed out, it is impossible for one person to present, in a single volume, the details of the life, composiotion, habitats, relationships, and actual and potential uses to man kind of the 500 (at last count) known species of yeasts. This book confirms the truth of this statement. However, our aim is actually more modest than that, and this book is an attempt to introduce the general reader, and possibly some inter ested specialists, to the lives of the yeasts in their natural and more artificial habitats, their use by human beings, and to give some idea of the wonderfully complex activities within the yeast cell, the characteristics of the metabolism and molecular biology of yeasts, and the applications of these characteristics to life in the present-dayworld ofhuman existence. The book proceeds from a brief chapter on what is and is not known of the origins and early history of the yeasts, through a description of their classification, relationships, habitats and general life style, their external morphology and internal structures and mechanisms within their cells, the regulatory mechanisms controlling processes such as signal transmis sion, mating, cell fusion, and many others."

To cope with the increasing problems created by agrochemicals such as plant fertilizers, pesticides and other plant protection agents, biological alternatives have been developed over the past years. These include biopesticides, such as bacteria for the control of plant diseases, and biofertilizer to improve crop productivity and quality. Especially plant growth promoting rhizobacteria (PGPR) are as effective as pure chemicals in terms of plant growth enhancement and disease control, in addition to their ability to manage abiotic and other stresses in plants. The various facets of these groups of bacteria are treated in this Microbiology Monograph, with emphasis on their emergence in agriculture. Further topics are Bacillus species that excrete peptides and lipopeptides with antifungal, antibacterial and surfactant activity, plant-bacteria-environment interactions, mineral-nutrient exchange, nitrogen assimilation, biofilm formation and cold-tolerant microorganisms.

Rhizosphere Engineering is a guide to applying environmentally sound agronomic practices to improve crop yield while also protecting soil resources. Focusing on the potential and positive impacts of appropriate practices, the book includes the use of beneficial microbes, nanotechnology and metagenomics. Developing and applying techniques that not only enhance yield, but also restore the quality of soil and water using beneficial microbes such as Bacillus, Pseudomonas, vesicular-arbuscular mycorrhiza (VAM) fungi and others are covered, along with new information on utilizing nanotechnology, quorum sensing and other technologies to further advance the science. Designed to fill the gap between research and application, this book is written for advanced students, researchers and those seeking real-world insights for improving agricultural production.

This Springer Protocols manual is a practical guide to the application of key molecular biology techniques in microbiological research. The focus is on experimental protocols, which are presented in an easy-to-follow way, as step-by-step procedures for direct use in the laboratory. Notes on how to successfully apply the procedures are included, as well as recommendations regarding materials and suppliers. In addition to the practical protocols, important background information and representative results of experiments using the described methods are presented. Researchers in all areas applying microbial systems, such as in molecular biology, genetics, pathology, and agricultural research will find this work of great value.

The creation of plant-based foods is one of the most rapidly advancing areas in the modern food industry. Many consumers are adopting more plant-based foods in their diets because of concerns about global warming and its devastating impacts on the environment and biodiversity. In addition, consumers are adopting plant-based diets for ethical and health reasons. As a result, many food companies are developing plant-based analogs of animal-based foods like dairy, egg, meat, and seafood products. This is extremely challenging because of the complex structure and composition of these animal-based foods. Next-Generation Plant-based Foods: Design, Production and Properties presents the science and technology behind the design, production, and utilization of plant-based foods. Readers will find a review of ingredients, processing operations, nutrition, quality attributes, and specific plant-based food categories such as milk and dairy products, egg and egg products, meat and seafood products, providing the fundamental knowledge required to create the next generation of healthier and more sustainable plant-based food alternatives.

The book describes how plant biomass can be used as renewable feedstock for producing and further processing various products. Particular attention is given to microbial processes both for the digestion of biomass and the synthesis of platform chemicals, biofuels and secondary products. Topics covered include: new metabolic pathways of microbes living on green plants and in silage; using lignocellulosic hydrolysates for the production of polyhydroxyalkanoates; fungi such as Penicillium as host for the production of heterologous proteins and enzymes; bioconversion of sugar hydrolysates into lipids; production of succinic acid, lactones, lactic acid and organic lactates using different bacteria species; cellulose hydrolyzing bacteria in the production of biogas from plant biomass; and isoprenoid compounds in engineered microbes.

This detailed book provides a comprehensive series of innovative research techniques and methodologies applied to the parasite genomics research area, all applying different approaches to analyzing parasite genomes and furthering the study of genetic complexity and the mechanisms of regulation. Beginning with chapters on novel sequencing and the bioinformatics pipeline, the volume continues by exploring diagnostic approaches using genomic tools, host-parasite interactions, as well as the genomics of parasite-derived extracellular vesicles. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Parasite Genomics: Methods and Protocols creates a detailed picture of genomic approaches for researchers seeking a better understanding of characterizing parasite nucleic acid content.

Biofilms -- Science and Technology covers the main topics of biofilm formation and activity, from basic science to applied aspects in engineering and medicine. The book presents a masterly discussion of microbial adhesion, the metabolism of microorganisms in biofilms, modelling of mass transfer and biological reaction within biofilms, as well as the behaviour of these microbial communities in industry (waste water treatment, heat exchanger biofouling, membranes, food processing) and in medicine (teeth, implants, prosthetic devices). Laboratory techniques and industrial monitoring methods are also presented. The book is directed at readers at the postgraduate level and is organised as a textbook, containing 11 chapters, a glossary, and a detailed subject index.

Proceedings of a Workshop, ICARDA, Syria, April 14-17, 1986.

The biennial TNF-family conferences have been held over the past 20 years, from the time that TNF was cloned. These meetings have followed the enormous progress in this field. Much is now known about the members of the TNF ligand and receptor families, their signaling proteins, mechanisms of action and cellular functions. This volume is the proceedings of the 12th TNF International Conference, held in April 2009. This conference focuses on the physiological, pathophysiological, and medical significance of these important regulators. Sessions at the meeting specifically address their involvement in immunity, development, apoptosis, autoimmunity, cancer, and infection, the normal function and pathology of the neuronal system, as well as major unresolved questions about their mechanisms of action.

Neurovirology, the study of viral infection of the ner vous system, has evolved at the interface of three of the most rapidly unfolding fields of investigation-neurobiology, vi rology, and immunology. In all three, increasing knowledge about the molecular structure of surface receptors, how in tracellular messages are transmitted, and how diversity is regulated genetically is provided, along with the techniques of molecular biology. This promises to give us knowledge not only about the process of infection and the complex host and viral determinants of neuroinvasiveness and neurovirulence, but eventually it will provide the background from which to engineer vaccines and to devise novel therapeutic agents. Animal virology and molecular biology developed quite independently from different origins. Animal virology was originally the province of the pathologists, and by clinical observation and histological preparations, they tried to ex plain the incubation period, the pathways of virus spread, and the mechanisms of disease. Molecular virology grew out of biochemistry, particularly through studies of bacterio phage, with emphasis on the physical and chemical structure of viruses and the sequences of biochemical events during the replicative cycle in cells."

In an age of antibiotic resistant infections, the study of biofilms is increasingly important. Microbes more than often exist in complex multi-species or polymicrobial communities, making infections difficult to detect, diagnose and treat. Given the increased focus on studying biofilms in research and laboratory settings, particularly under conditions that closely mimic the clinical state, it is important to get an overview of the recent methods, model systems and tools being developed and employed in this context. This book offers readers the opportunity to learn more about current methods being used in the investigation of multi-species biofilms, both in vivo and in vitro. For this, the book highlights new technologies built and designed for the study of multiple species within biofilm communities, including those that can be leveraged for the evaluation of antimicrobial treatment approaches. The application of these state-of-the-art techniques to further our understanding of multi-species biofilms will be discussed and the reader will learn how the clinical microenvironment and the development of biofilm communities are considered when developing such tools. With cutting-edge contributions from experts in the respective domains, this book will benefit translational and basic research scientists, as well as clinicians, and is an informative resource for educators and their students.

Two-component systems are signaling pathways that regulate many bacterial characteristics, such as virulence, pathogenicity, symbiosis, motility, nutrient uptake, secondary metabolite production, metabolic regulation, cell division, and many more. These systems regulate physiological processes in response to environmental or cellular parameters and enable adaptation to changing conditions. They are also potential targets for anti-microbial drug design. In recent years, significant advances have been made in the understanding of the role of two-component systems, and molecular studies have uncovered basic mechanisms of signaling. In this book, expert contributors from around the world present the current knowledge on two-component systems in bacteria and critically evaluate the vast amount of exciting new information that has been brought to light in recent years. The book covers various topics, including: the structure-function analysis of two-component systems * the sensing mechanisms * essential or atypical two-component systems and signaling networks * two-component systems in stress responses * two-component systems in developmental processes * two-component systems in virulence and symbiosis. The book provides a comprehensive overview for graduate students, academic scientists, and researchers in the pharmaceutical industry. This major reference work is essential reading for everyone working on bacterial regulation or anti-microbial drug design and is a recommended volume for all microbiology libraries.

Nitrogen fixation is a key component of the nitrogen cycle, one of the most fundamental cycles in the biosphere. Conversion of atmospheric nitrogen into organic nitrogen compounds can be carried out only by certain bacteria and blue-green algae (cyanobacteria). Some nitrogen fixing bacteria live symbiotically with leguminous plants such as peas, beans, clover, and certain tropical trees in nodules on the plants' roots, while others live independently in the soil and aquatic habitats. By the activity of these microorganisms, the soil is enriched with the nitrogen required for plant growth and function. Thus the topic is of considerable practical as well as fundamental importance. In Biological Nitrogen Fixation, the leading researchers in nitrogen fixation from all over the world contribute up-to-the-minute general reviews on all aspects of the subject, from the molecular biology and genetics to the biochemistry, physiology, and ecology of nitrogen fixation. This compendium of current research is an indispensable reference for all involved in nitrogen fixation research, and of use to all who deal indirectly with the subject. It will also serve as a thoroughly up-to-date textbook for graduate students in microbiology, plant science, biochemistry, molecular biology, plant pathology, agronomy, and genetics.

Microbial Diversity in Hotspots provides an introduction to microbial diversity and microbes in different hotspots and threatened areas. The book gives insights on extremophiles, phyllosphere and rhizosphere, covers fungal diversity, conservation and microbial association, focuses on biodiversity acts and policies, and includes cases studies. Microbes explored are from the coldest to the hottest areas of the world. Although hotspots are zones with extremely high microbiology activities, the knowledge of microbial diversity from these areas is very limited, hence this is a welcome addition to existing resources.

This book describes many novel approaches of microbial bioremediation including conventional and modern approaches, metagenomics, biosurfactants and nano-based bioremediation. Also presents up-to-date knowledge about biodegradation of solid and liquid contaminants in the rhizospheric zone by plant (rhizo)-microbiome interface. It also illustrates communication pathways based on evolving methodologies, bioinformatic tools which provides insights into the functional dynamics of bioremediation process by the host-microbiome interface. The different chapters explain the mechanism and outcomes during the process of bioremediation. The book broadly depicts the following: Advances in bioremediation through nanoremediation, rhizo-remediation, bioremediation of different ecosystems like polluted waters, industrial effluents, bioremediation of metal and organic pollutants, toxic dyes etc. The book is very useful for researchers and students in the fields of applied and environmental microbiology. It is also meant for industry experts and professionals working in the field of bioremediation and waste management.

This book collates the latest trends and technological advancements in bioremediation, especially for its monitoring and assessment. Divided into 18 chapters, the book summarizes basic concepts of waste management and bioremediation, describes advancements of the existing technologies, and highlights the role of modern instrumentation and analytical methods, for environmental clean-up and sustainability. The chapters cover topics such as the role of microbial fuel cells in waste management, microbial biosensors for real-time monitoring of bioremediation processes, genetically modified microorganisms for bioremediation, application of immobilized enzyme reactors, spectroscopic techniques, and in-silico approaches in bioremediation monitoring and assessment. The book will be advantageous not only to researchers and scholars interested in bioremediation and sustainability but also to professionals and policymakers.

This book discusses soil and recycling management in the Anthropocene era. Nitrogen shortage is one of nature's most important productivity regulators, but since the advent of technical nitrogen fixation (TNF), biological nitrogen fixation (BNF) input has nearly doubled, particularly in grass and arable lands covering over 13 million km2 of the Earth's surface. This book explores how monoculture grass, arable lands and forests are often over fertilized with TNF, animal slurries, sewage sludge, or municipally produced composts, and as a result, flora and fauna that have adapted to a nitrogen shortage in the soil will have to adjust to a surplus; those that are unable to adapt will disappear.

Coronavirus disease 2019 (COVID-19) is an infectious disease caused by SARS-CoV-2. It was first identified in December 2019 in Wuhan, Hubei, China, and has resulted in an ongoing pandemic. As of July 2020, more than 13.8 million cases have been reported across 188 countries and territories, resulting in more than 590,000 deaths. COVID 19: Tackling Global Pandemics through Scientific and Social Tools, is an amalgamation of scientific and social perspective. The book provides a selection of handpicked themes and topics relevant to COVID 19 pandemic across various disciplines delivered by experts in the domain. The Opinion section is a unique component of this book discussing important issues concerning the COVID 19. COVID 19: Tackling Global Pandemics through Scientific and Social Tools serves as single source of information ranging from clinical research to social science and even biotechnology to engineering in a single platform. But there is scarcity of a quality document that summarizes various aspects of a single event. Therefore, the purpose of this book is to provide scientific and social information on COVID 19 to all sectors of readers i.e. from students to researchers and even policy makers Divided into 13 chapters, the book begins with an in-depth introduction to the highly infectious disease COVID19. Followed by chapters on interventions, vaccine development, prevention and control COVID 19: Tackling Global Pandemics through Scientific and Social Tools also provides insights to current global situation, mathematical models and social factors like distancing and hand-washing. The book closes with a review on the use of artificial intelligence and engineered intervention. All are presented in a practical short format, making this volume a valuable resource for very broad academic audience.

Additives have been used in the food sector for centuries, aiming to maintain or improve food quality in terms of freshness, appearance, texture and taste. Most food additives are synthetic chemical compounds classified as antioxidants, antimicrobials, colorants and sweeteners. In the last decades, several synthetic food additives have been correlated with adverse reactions in humans, which has caused the safety of synthetic food additives to be reviewed and discussed by international organizations. At the same time, there is increasing consumer demand for more natural and environmentally friendly food products and additives. Therefore, synthetic food additives have been replaced with natural food additives. Although the use of natural additives is a hot topic in food science, to date no book has systematically reviewed the application of natural additives in food products. Natural additives in foods presents an exhaustive analysis of the most recent advances in the application of natural additives in the food sector. Covering natural antioxidants, antimicrobials, colorants and sweeteners, this text also focuses on unconventional sources of natural additives, valorization and toxicological aspects, consumer attitudes and regulatory aspects. The main applications of natural antioxidants are fully covered, including polyphenols, ascorbic acid, carotenoids, tocopherols and proteins. Natural antimicrobial applications from polyphenols and essential oils to poly-L-Lysine are analyzed, as are natural colorants like anthocyanins, annatto, betalains and paprika. The encapsulation, trapping, and adsorption of natural additives are studied, and consumer perceptions and preferences are major focuses. Researchers will find up-to-date regulatory specifics for the United States and European Union. For any researcher in need of an expansive single source containing all relevant and updated information for the use of natural additives in foods, this book is a much needed addition to the field.