The refinement of molecular techniques and the development of new probes of the phylogeny of diazotrophs has revealed an extreme biodiversity among the nitrogen fixers, which helps explain the role that nitrogen fixation plays in maintaining life on Earth. The most efficient ecosystems are those where the bacteria are associated with a plant in differentiated organs to benefit crop productivity. Most short-term benefit from fundamental research on nitrogen fixation is likely to result in the improvement of existing nitrogen-fixing symbiotic or associative systems. Longer-term efforts are aimed at extending the nitrogen-fixing capacity to other organisms, including transfer of the genetic information for efficient nitrogen fixation into the plant genome and using current knowledge of microbe-plant interactions to extend symbiosis to cereals and, in particular, to rice. Related challenges in sustainable agriculture and forestry include the creation of new nitrogen-fixing associations. All of these approaches were discussed at the 11th International Congress on Nitrogen Fixation, Paris, France, July 20-25, 1997 and covered in the present proceedings volume.

Linear plasmids of microbes represent a heterogenous group of extrachromosomal genetic elements initially assumed to be rare and peculiar. However, we now know that they are fairly frequently occurring plasmids in bacterial and eukaryotic species. Viral strategies to avoid shortening of the linear molecules during replication imply a common ancestry. Linear plasmids may be beneficial, neutral or detrimental for the respective host; functions include production of protein toxins, specific catabolic capabilities, antibiotic resistance, pathogenicity factors, and senescence induction.

Microbial Linear Plasmids constitutes the first attempt to comprehensively assemble current knowledge of different types of such elements, highlight recent developments in the field, and challenge the distinction between viruses and linear plasmids.

"This water" he told me, "runs out to the eastern region, and flows into the Arabah; and when it comes into the sea, into the sea of foul waters [i. e. , the Dead Sea], the water will become wholesome. Every living creature that swarms will be able to live wherever this stream goes; the fish will be very abundant once these waters have reached there. It will be wholesome, and everything will live wherever this stream goes. Fishermen shall stand beside it all the way from En-gedi to En-eglaim; it shall be a place for drying nets; and the fish will be of various kinds [and] most plentiful, like the fish of the Great Sea. " Ezekiel's prophecy (Ezekiel 47: 8-10) for revival and purification of the Dead Sea waters This new book on "Halophilic Microorganisms and their Environments" is the fifth volume in the COLE series (Cellular Origin and Life in Extreme Habitats (see: http://www. wkap. nl/prod/s/COLE). In the previous books we covered aspects of enigmatic microorganisms, microbial diversity, astrobiology, and symbiosis, so this book on halophilic microbes adds a fitting link to the rest of series' books. Since ancient times hypersaline habitats have been considered extreme environments, and some were thought not to sustain life at all. Yet, every organism requires salt for its existence. Salty places have been compared to an environment of extinction (e. g. , the Dead Sea).

The control of E.coli 0157 is at the heart of the environmental health practitioner's professional agenda. This book is aimed at health professionals who need to be fully informed about the sources and effects of the organism in order to provide advice and enforce legislation at local level as well as providing non specialist professionals with a practical introduction to the terminology, methods and issues surrounding the diagnosis and control of E.coli.

eBook available with sample pages: 0203302710

In this work, experts review the latest research in the bioremediation of mercury, including the genetic engineering of bacteria and plants.

This book covers the wide set of well-regulated virulence factors and defense mechanisms of Pseudomonas aeruginosa focusing on stress responses and the evolution of this opportunistic human pathogen. Pseudomonas aeruginosa is responsible for one out of ten hospital infections. Additionally, this Gram-negative bacterium is accountable for persistent infections in immunocompromised individuals and the leading cause of chronic lung infections in cystic fibrosis patients. This book provides insight on the metabolic versatility of Pseudomonas aeruginosa and its mechanisms for biofilm formation that make this organism highly efficient in causing infections. The book invites the readers to learn more about the intrinsic ability of Pseudomonas aeruginosa to resist a wide variety of antimicrobial agents due to the concerted action of multidrug efflux pumps, antibiotic-degrading enzymes, and the low permeability of bacterial cellular envelopes. Particular focus is put on the evolutionary role of different types of protein-secretion systems in pathogenesis, flagella and their role in chemotaxis and surface sensing, and host-pathogen interactions. This book is a useful introduction to the field for junior scientists interested in the biology and pathogenesis of Pseudomonas aeruginosa. It is also an interesting read for advanced scientists and medical specialists working within this field, providing a broader view of the topic beyond their specific area of specialization.

This book achieves an invaluable, contemporary picture of the phylum as a whole - Derek Wakelin - Parasitology

Plant roots may not only be colonized by mycorrhizal fungi, but also by a myriad of bacterial and fungal root endophytes that are usually not considered by the investigators of classic symbioses. This is the first book dedicated to the interactions of non-mycorrhizal microbial endophytes with plant roots.

The phenotypes of these interactions can be extremely plastic, depending on environmental factors, nutritional status, genetic disposition and developmental stages of the two partners. The book deals with diversity, life history strategies, interactions, applications in agriculture and forestry, methods for isolation, cultivation, and both conventional and molecular methods for identification and detection of these endophytes. The comprehensive reviews demonstrate the high diversity of interactions and will provoke further studies to better understand the mechanisms which determine whether a plant-microbial interaction remains asymptomatic, leads to disease or to a mutualistic interaction.

In this timely book, internationally renowned experts review literally every aspect of cutting edge coronavirus research, providing the first coherent picture of this molecular and cellular biology since the outbreak of SARS in 2003. The book is divided into two sections. Part I focuses on the molecular biology of the virus itself and includes topics such as coronavirus binding and entry, replicase gene function, cis-acting RNA elements, coronavirus discontinuous transcription, reverse genetics, genome packaging, and molecular evolution. In Part II of the book, the focus is on molecular and cellular pathogenesis and infection control. This section includes reviews of the three prototype viruses, namely avian infectious bronchitis virus, feline coronavirus, and mouse hepatitis virus. Other topics include SARS-CoV virus pathogenesis, SARS-CoV interaction with the host INF and antiviral cytokines, the newly recognized bat coronaviruses and human coronavirus NL63, and strategies for corona

The new series "Microbiology Monographs" begins with two volumes on intracellular components in prokaryotes. In this second volume, "Complex Intracellular Structures in Prokaryotes," the components, labeled complex intracellular structures, encompass a multitude of important cellular functions. Continuing and newly initiated research will provide a clearer understanding of the complex intracellular structures known at present and will bring to light surprising new ones as well.

Bacteria and fungi are able to aggregate together or on surfaces in densely packed microcolonies, facilitated by extracellular polymeric substances for cell protection and stability. These biofilms have proven to be extremely hard to eradicate and remove once established. In chronic infections, this condition can result in a high degree of morbidity and mortality as regular antibiotic treatments are ineffective against biofilms. In industrial facilities, the formation of biofilms can ruin production and result in enormous financial losses. In this book, the current state of antibiofilm research is presented by experts from around the world. Novel, cutting-edge techniques and new optimized strategies based on established methods are discussed in chapters focused on biofilm prevention, treatment and control for the application in clinical, industrial and veterinary settings. Antibiofilm strategies, such as chemical and enzymatic treatments, surface modification and coatings, quorum sensing inhibition and dispersal induction, phage therapy, cold plasma treatment, hyperbaric oxygen treatment, and metal-based nanomedicine are covered, among many others. This book contributes to the UN's Sustainable Development Goal 3: Good Health and Well-Being and is a valuable resource for healthcare professionals, microbiologists, academics and for educators to inform curricula of universities and colleges.

In this book we present ten chapters describing the synthesis and application of nanomaterials for health, food, agriculture and bioremediation. Nanomaterials, with unique properties are now being used to improve food and agricultural production. Research on nanomaterials is indeed revealing new applications that were once thought to be imaginary. Specifically, applications lead to higher crop productivity with nanofertilisers, better packaging, longer food shelf life and better sensing of aromas and contaminants. these applications are needed in particular in poor countries where food is scarce and the water quality bad. Nanotechnology also addresses the age old issue of water polluted by industrial, urban and agricultural pollutants. For instance, research produces nanomaterials that clean water more efficiently than classical methods, thus yielding water for drinking and irrigation. However, some nanomaterials have been found to be toxic. Therefore, nanomaterials should be engineered to be safe for the environment.

Applies an inductive experimental approach to recognize, control, and resolve the variables that effect the wine-making process and the qual ity of the final product{focusing on the grape variety-yeast interacti on controversy. Contains over 300 original drawings, photographs, and photomicrographs-unavailable in any other source-that illustrate the d iagnostic morphology of wine yeast and bacteria used to track wine spo ilage and related problems. Promotes a better understanding of the bio technological phenomena in the wine-making process in which yeast enzy mology plays a key role with plant physiology.

Genome Engineering, Volume 52 in the Methods in Microbiology series, highlights new advances in the field with this new volume presenting interesting chapters written by an international board of authors. Topics covered include Whole genome transplantation in Mollicutes, Natural transformation as a tool in Acinetobacter baylyi: evolution by amplification of gene copy number, Natural transformation as a tool in Acinetobacter baylyi: streamlined engineering and mutational analysis, Methods to characterize cryptic biosynthetic gene clusters in Streptomyces, Genome engineering in bacteria: current and prospective applications, Tools for activation and identification of cryptic biosynthesis pathways in Streptomyces.

Advances in Applied Microbiology, Volume 122 continues the comprehensive reach of this widely read and authoritative review source in microbiology. Users will find invaluable references and information on a variety of areas relating to the topic of microbiology. This release includes updates on BioMateriOME: to understand microbe-material interactions within sustainable, living architectures.

Biochemical studies on plant virus RNA replication were in their infancy even in 1999-2000. The picture has improved much since structural and sequence requirements of viral RNA replication and synthesis are beginning to be understood, primarily because of the genetic, molecular, biochemical, and enzymatic studies conducted during the last six years. Certain virus-encoded essential proteins, nucleotide sequence motifs, and RNA secondary structures are central to virus RNA replication, which has a number of stages. Each stage is a complex phenomenon requiring specific factors and conditions. All this has generated much new information so that replication of plus-sense RNA plant viruses has now emerged as a rapidly developing field. However a lot of distance still has to be covered and traversing this distance could prove difficult because no organised corpus of knowledge is available. Hopefully, this book fills the niche...

This volume explores the latest techniques used to study environmental microbial evolution, with a focus on methods capable of addressing deep evolution at long timescales. The chapters in this book are organized into three parts. Part One introduces molecular dating approaches and time calibration ideas that allow for the determination of evolutionary timescales of microbial lineages. Part Two describes several advanced phylogenomic tools such as models for genome tree construction, a taxon sampling method, outgroup-independent tree-rooting methods, and gene family evolution models. Part Three covers techniques used to study trait evolution. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, Environmental Microbial Evolution: Methods and Protocols is a valuable tool for all researchers who are interested in learning more about this important and evolving field.

This text contains proceedings of the Federation of European Microbiological Societies Symposium, held at Copenhagen, Denmark, during 4-8 August 1985.

Combining the disciplines of biological, physical and chemical science, microbial forensics has a rapidly rising profile in a world increasingly troubled by the threat of 'biocrime' and 'bioterrorism'. This valuable resource is a major addition to a body of literature reckoned to lack sufficient breadth. It presents a variety of phenotypic and trace signature methodologies associated with cultured microorganisms that, despite being genetically identical, may be characterized by differing cultural environments. One of the central challenges faced by those working in this field is the sheer diversity of potentially harmful agents, which in themselves total more than 1000 viruses, bacteria, fungi and protozoan parasites. Their numerous additional variants render the process of 'fingerprinting' biological agents notoriously difficult, especially when the limitations of genetic analysis are factored in. Attribution of crime is relatively easy through human DNA, but lacking the genetic individuation of humans and animals, microbial forensics has to complement phylogenetic techniques with chemical and physical ones. In the best case, genetic analysis in the 'biocrime' sector can exclude sources, narrow the population of possible sources and support associations with potential sources. To complement these genetic techniques, chemical and physical methods can be used to compare 'signatures' imparted to microbial samples by environments in which they are grown and processed. Collating a range of microbiological fingerprinting techniques in one volume, and covering everything from statistical analysis to laboratory protocols, this publication furthers the aim of forensic investigators who need robust and legally admissible forensic evidence to present in a courtroom.

This thesis studies the impact of food processing on the stability and antioxidant capacity of anthocyanins in aqueous and real food systems. It investigates the effects of temperature and pH on the stability and antioxidant capacity of anthocyanins in aqueous systems and in real semi-solid and solid food systems including bread and biscuits. The results of this thesis offer food manufacturers valuable guidelines on the production of functional foods containing anthocyanins, helping to reduce anthocyanins loss and achieve a desired amount of anthocyanins in foods with extra health benefits.

This edited volume covers all aspects of microbes in consortia; their roles in the ecological balance of soil by mineralize soil nutrients, plant growth promotion, protecting plants from disease by acting as biocontrol agents etc. Step-by-step descriptions are provided to the development and designing strategies of microbial consortia of rhizobacteria, phytohormone producing with biocontrol; ACC-deaminase producing with siderophore producing; vice-versa, and many combinations of multifaceted bacteria. The development of microbial consortia into successful bioinoculant and biofertilizers is also included in various chapters. In addition, molecular mechanisms to study the synergistic behaviors of rhizobacteria, accompanied by numerous helpful schematic drawings. Using phylogeny to justify the molecular similarity among two different bacteria identifies the possibility of microbial synergism, fruitful to development of microbial consortium and establish them in the rhizosphere with consorted mechanisms. In addition, clear drawings are included in support of understanding the natural phenomenon of synergism in below-ground ecosystem. Essential information is provided on ecological management by consorted mechanisms of rhizobacteria that directly affect ‘agriculture sustainability’ and an individual chapter is devoted to the understanding of future research, and addressing bottlenecks and successful steps.  This book assists the academicians, researchers and NGOs in negotiating the steep learning curve involved in gaining the skills needed to perform design and development of microbial consortiums, preparation of PGPR-based fertilizers, which offers significant advantages in terms of pertaining novel knowledge on the groundbreaking research, still ongoing. 

This Microbiology Monographs volume covers the latest advances in laccase applications in bioremediation and waste valorisation. The first three chapters provide a comprehensive introduction to fungal and bacterial laccases (the two most important enzyme groups from an application viewpoint) and their practical use in bioremediation and lignocellulosic waste valorisation. Subsequent chapters discuss possible combinations of laccases and further potentially collaborating enzymes, and offer in-depth insights into laccase immobilisation for wastewater treatment and environmental biosensor applications of laccases. Lastly, the book addresses the quest for enzymes with improved and better-fitting properties, covering laccase engineering by directed and computational evolution, and novel enzymes from extreme environments. As such, it is a fascinating read for microbiologists in both industry and academia.

Dysfunction of nuclear-cytoplasmic transport systems has been associated with many human diseases. Thus, understanding of how functional this transport system maintains, or through dysfunction fails to maintain remains the core question in cell biology. In eukaryotic cells, the nuclear envelope (NE) separates the genetic transcription in the nucleus from the translational machinery in the cytoplasm. Thousands of nuclear pore complexes (NPCs) embedded on the NE selectively mediate the bidirectional trafficking of macromolecules such as RNAs and proteins between these two cellular compartments. In this book, the authors integrate recent progress on the structure of NPC and the mechanism of nuclear-cytoplasmic transport system in vitro and in vivo.

This book illustrates the importance of microbiome interactions in sustainable agriculture and the environment. The chapters of the book provide information pertaining to the vast diversity of microbiomes in many ecosystems and their functional dynamics. The book also discusses bioremediation, space microbiomes, geo microbiomes, coral microbiomes, antibiotic resistomes, and rhizomicrobiome. It also sheds light on the complex syntrophic and other symbiotic interactions between bacteria, protists, plants, and certain animals in agricultural and environmental systems. The book, in turn, provides an understanding of the adaptation, resilience, and evolution of microbial ecosystems. Further, the chapters cover metagenomics analysis of microbiomes of a novel or extreme environments, microbial resilience or temporal fluctuations, symbiosis and co-evolution of the microbiome, and novel microbial interactions in agriculture and environment. Finally, the book elucidates a comprehensive yet representative description of complex structural and functional diversity within the plant and environmental microbiomes to reveal their immense potential. This book covers United Nations Sustainable Developmental Goal 2 towards Zero Hunger.