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Books > Computing & IT > Computer software packages > Other software packages > Mathematical & statistical software
This Brief provides a roadmap for the R language and programming environment with signposts to further resources and documentation.
Until recently, acquiring a background in the basic methodological principles that apply to most types of investigations meant struggling to obtain results through laborious calculations. The advent of statistical software packages has removed much of the tedium and many of the errors of manual calculations and allowed a marked increase in the depth and sophistication of analyses. Although most statistics classes now incorporate some instruction in using a statistics package, most introductory texts do not. Quantitative Investigations in the Biosciences using MINITAB fills this void by providing an introduction to investigative methods that, in addition to outlining statistical principles and describing methods of calculations, also presents essential commands and interprets output from the statistics package MINITAB. The author introduces the three basic elements of investigations-design, analysis, and reporting-using an extremely accessible approach that keeps mathematical detail to a minimum. He groups statistical tests according to the type of problem they are used to examine, such as comparisons, sequential relationships, and associations. Quantitative Investigations in the Biosciences using MINITAB draws techniques and examples from a variety of subjects, ranging from physiology and biochemistry through to ecology, behavioral sciences, medicine, agriculture and horticulture, and complements the mathematical results with formal conclusions for all of the worked examples. It thus provides an ideal handbook for anyone in virtually any field who wants to apply statistical techniques to their investigations.
Written for the practicing electronics professional, Tolerance Analysis of Electronic Circuits Using MATHCADä offers a comprehensive, step-by-step treatment of methods used to perform analyses essential to the design process of circuit cards and systems of cards, including:
CUDA is now the dominant language used for programming GPUs, one of the most exciting hardware developments of recent decades. With CUDA, you can use a desktop PC for work that would have previously required a large cluster of PCs or access to a HPC facility. As a result, CUDA is increasingly important in scientific and technical computing across the whole STEM community, from medical physics and financial modelling to big data applications and beyond. This unique book on CUDA draws on the author's passion for and long experience of developing and using computers to acquire and analyse scientific data. The result is an innovative text featuring a much richer set of examples than found in any other comparable book on GPU computing. Much attention has been paid to the C++ coding style, which is compact, elegant and efficient. A code base of examples and supporting material is available online, which readers can build on for their own projects.
Written specifically for those with no prior programming experience and minimal quantitative training, this accessible text walks behavioral science students and researchers through the process of programming using MATLAB. The book explores examples, terms, and programming needs relevant to those in the behavioral sciences and helps readers perform virtually any computational function in solving their research problems. Principles are illustrated with usable code. Each chapter opens with a list of objectives followed by new commands required to accomplish those goals. These objectives also serve as a reference to help readers easily relocate a section of interest. Sample code and output and chapter problems demonstrate how to write a program and explore a model so readers can see the results obtained using different equations and values. A web site provides solutions to selected problems and the book's program code output and examples so readers can manipulate them as needed. The outputs on the website have color, motion, and sound. Highlights of the new edition include: *Updated to reflect changes in the most recent version of MATLAB, including special tricks and new functions. *More information on debugging and common errors and more basic problems in the rudiments of MATLAB to help novice users get up and running more quickly. *A new chapter on Psychtoolbox, a suite of programs specifically geared to behavioral science research. *A new chapter on Graphical User Interfaces (GUIs) for user-friendly communication. *Increased emphasis on pre-allocation of memory, recursion, handles, and matrix algebra operators. The book opens with an overview of what is to come and tips on how to write clear programs followed by pointers for interacting with MATLAB, including its commands and how to read error messages. The matrices chapter reviews how to store and access data. Chapter 4 examines how to carry out calculations followed by a review of how to perform various actions depending on the conditions. The chapter on input and output demonstrates how to design programs to create dialogs with users (e.g., participants in studies) and read and write data to and from external files. Chapter 7 reviews the data types available in MATLAB. Readers learn how to write a program as a stand-alone module in Chapter 8. In Chapters 9 and 10 readers learn how to create line and bar graphs or reshape images. Readers learn how to create animations and sounds in Chapter 11. The book concludes with tips on how to use MATLAB with applications such as GUIs and Psychtoolbox. Intended as a primary text for Matlab courses for advanced undergraduate and/or graduate students in experimental and cognitive psychology and/or neuroscience as well as a supplementary text for labs in data (statistical) analysis, research methods, and computational modeling (programming), the book also appeals to individual researchers in these disciplines who wish to get up and running in MATLAB.
This book presents a theoretical and practical overview of computational modeling in bioengineering, focusing on a range of applications including electrical stimulation of neural and cardiac tissue, implantable drug delivery, cancer therapy, biomechanics, cardiovascular dynamics, as well as fluid-structure interaction for modelling of organs, tissues, cells and devices. It covers the basic principles of modeling and simulation with ordinary and partial differential equations using MATLAB and COMSOL Multiphysics numerical software. The target audience primarily comprises postgraduate students and researchers, but the book may also be beneficial for practitioners in the medical device industry.
R is now the most widely used statistical package/language in university statistics departments and many research organisations. Its great advantages are that for many years it has been the leading-edge statistical package/language and that it can be freely downloaded from the R web site. Its cooperative development and open code also attracts many contributors meaning that the modelling and data analysis possibilities in R are much richer than in GLIM4, and so the R edition can be substantially more comprehensive than the GLIM4 edition. This text provides a comprehensive treatment of the theory of statistical modelling in R with an emphasis on applications to practical problems and an expanded discussion of statistical theory. A wide range of case studies is provided, using the normal, binomial, Poisson, multinomial, gamma, exponential and Weibull distributions, making this book ideal for graduates and research students in applied statistics and a wide range of quantitative disciplines.
This primer has been designed as a self-instructional text which serves to introduce the reader to both the principles of statistical modelling of covariance structures and to the use of the EQS software package. It is divided into three parts - the first covering the basic ideas and language of covariance structure modelling together with an introduction to the EQS package. The second section covers a wide variety of models suitable for cross-sectional and longitudinal data and the final section discusses a wide variety of practical problems. This book should be of interest to researchers in psychology, sociology and medicine who use the EQS software; applied and consultant statisticians.
This book is a valuable read for a diverse group of researchers and practitioners who analyze assessment data and construct test instruments. It focuses on the use of classical test theory (CTT) and item response theory (IRT), which are often required in the fields of psychology (e.g. for measuring psychological traits), health (e.g. for measuring the severity of disorders), and education (e.g. for measuring student performance), and makes these analytical tools accessible to a broader audience. Having taught assessment subjects to students from diverse backgrounds for a number of years, the three authors have a wealth of experience in presenting educational measurement topics, in-depth concepts and applications in an accessible format. As such, the book addresses the needs of readers who use CTT and IRT in their work but do not necessarily have an extensive mathematical background. The book also sheds light on common misconceptions in applying measurement models, and presents an integrated approach to different measurement methods, such as contrasting CTT with IRT and multidimensional IRT models with unidimensional IRT models. Wherever possible, comparisons between models are explicitly made. In addition, the book discusses concepts for test equating and differential item functioning, as well as Bayesian IRT models and plausible values using simple examples. This book can serve as a textbook for introductory courses on educational measurement, as supplementary reading for advanced courses, or as a valuable reference guide for researchers interested in analyzing student assessment data.
Provides researchers with a reproducible research workflow for using R/RStudio to make the entire researchprocess reproducible; from data gathering, to analysis, to presentation Includes instructions not only for creating reproducible research in R, but also extensively discusses how to take advantage of recent developments in RStudio. Emphasizes the presentation of reproducible research with non-print formats such as HTML5 slideshows, blogs, and other web-based content. Covers a range of techniques to organize and remotely store files at all stages of the research process. These techniques both streamline the research process, especially by making revisions easier, and enhance The book itself will be reproducible, as all of the data, analysis, and markup files will be made available online.
The purpose of this handbook is to allow users to learn and master the mathematics software package MATLAB (R), as well as to serve as a quick reference to some of the most used instructions in the package. A unique feature of this handbook is that it can be used by the novice and by experienced users alike. For experienced users, it has four chapters with examples and applications in engineering, finance, physics, and optimization. Exercises are included, along with solutions available for the interested reader on the book's web page. These exercises are a complement for the interested reader who wishes to get a deeper understanding of MATLAB. Features Covers both MATLAB and introduction to Simulink Covers the use of GUIs in MATLAB and Simulink Offers downloadable examples and programs from the handbook's website Provides an introduction to object oriented programming using MATLAB Includes applications from many areas Includes the realization of executable files for MATLAB programs and Simulink models
The fun and friendly guide to mastering IBM's Statistical Package for the Social Sciences Written by an author team with a combined 55 years of experience using SPSS, this updated guide takes the guesswork out of the subject and helps you get the most out of using the leader in predictive analysis. Covering the latest release and updates to SPSS 27.0, and including more than 150 pages of basic statistical theory, it helps you understand the mechanics behind the calculations, perform predictive analysis, produce informative graphs, and more. You'll even dabble in programming as you expand SPSS functionality to suit your specific needs. Master the fundamental mechanics of SPSS Learn how to get data into and out of the program Graph and analyze your data more accurately and efficiently Program SPSS with Command Syntax Get ready to start handling data like a pro--with step-by-step instruction and expert advice!
Designed to help readers analyze and interpret research data using IBM SPSS, this user-friendly book shows readers how to choose the appropriate statistic based on the design; perform intermediate statistics, including multivariate statistics; interpret output; and write about the results. The book reviews research designs and how to assess the accuracy and reliability of data; how to determine whether data meet the assumptions of statistical tests; how to calculate and interpret effect sizes for intermediate statistics, including odds ratios for logistic and discriminant analyses; how to compute and interpret post-hoc power; and an overview of basic statistics for those who need a review. Unique chapters on multilevel linear modeling; multivariate analysis of variance (MANOVA); assessing reliability of data; multiple imputation; mediation, moderation, and canonical correlation; and factor analysis are provided. SPSS syntax with output is included for those who prefer this format. The new edition features: IBM SPSS version 22; although the book can be used with most older and newer versions New discusiion of intraclass correlations (Ch. 3) Expanded discussion of effect sizes that includes confidence intervals of effect sizes (ch.5) New information on part and partial correlations and how they are interpreted and a new discussion on backward elimination, another useful multiple regression method (Ch. 6) New chapter on how use a variable as a mediator or a moderator (ch. 7) Revised chapter on multilevel and hierarchical linear modeling (ch. 12) A new chapter (ch. 13) on multiple imputation that demonstrates how to deal with missing data Updated web resources for instructors including PowerPoint slides, answers to interpretation questions, extra SPSS problems and for students, data sets, and chapter outlines and study guides. " IBM SPSS for Intermediate Statistics, Fifth Edition "provides helpful teaching tools: all of the key SPSS windows needed to perform the analyses outputs with call-out boxes to highlight key points interpretation sections and questions to help students better understand and interpret the output extra problems with realistic data sets for practice using intermediate statistics Appendices on how to get started with SPSS, write research questions, and basic statistics. An ideal supplement for courses in either intermediate/advanced statistics or research methods taught in departments of psychology, education, and other social, behavioral, and health sciences. This book is also appreciated by researchers in these areas looking for a handy reference for SPSS"
Construct, analyze, and visualize networks with networkx, a Python language module. Network analysis is a powerful tool you can apply to a multitude of datasets and situations. Discover how to work with all kinds of networks, including social, product, temporal, spatial, and semantic networks. Convert almost any real-world data into a complex network--such as recommendations on co-using cosmetic products, muddy hedge fund connections, and online friendships. Analyze and visualize the network, and make business decisions based on your analysis. If you're a curious Python programmer, a data scientist, or a CNA specialist interested in mechanizing mundane tasks, you'll increase your productivity exponentially. Complex network analysis used to be done by hand or with non-programmable network analysis tools, but not anymore! You can now automate and program these tasks in Python. Complex networks are collections of connected items, words, concepts, or people. By exploring their structure and individual elements, we can learn about their meaning, evolution, and resilience. Starting with simple networks, convert real-life and synthetic network graphs into networkx data structures. Look at more sophisticated networks and learn more powerful machinery to handle centrality calculation, blockmodeling, and clique and community detection. Get familiar with presentation-quality network visualization tools, both programmable and interactive--such as Gephi, a CNA explorer. Adapt the patterns from the case studies to your problems. Explore big networks with NetworKit, a high-performance networkx substitute. Each part in the book gives you an overview of a class of networks, includes a practical study of networkx functions and techniques, and concludes with case studies from various fields, including social networking, anthropology, marketing, and sports analytics. Combine your CNA and Python programming skills to become a better network analyst, a more accomplished data scientist, and a more versatile programmer. What You Need: You will need a Python 3.x installation with the following additional modules: Pandas (>=0.18), NumPy (>=1.10), matplotlib (>=1.5), networkx (>=1.11), python-louvain (>=0.5), NetworKit (>=3.6), and generalizesimilarity. We recommend using the Anaconda distribution that comes with all these modules, except for python-louvain, NetworKit, and generalizedsimilarity, and works on all major modern operating systems.
This Element is intended for students and practitioners as a gentle and intuitive introduction to the field of discrete-time yield curve modelling. I strive to be as comprehensive as possible, while still adhering to the overall premise of putting a strong focus on practical applications. In addition to a thorough description of the Nelson-Siegel family of model, the Element contains a section on the intuitive relationship between P and Q measures, one on how the structure of a Nelson-Siegel model can be retained in the arbitrage-free framework, and a dedicated section that provides a detailed explanation for the Joslin, Singleton, and Zhu (2011) model.
Advanced R helps you understand how R works at a fundamental level. It is designed for R programmers who want to deepen their understanding of the language, and programmers experienced in other languages who want to understand what makes R different and special. This book will teach you the foundations of R; three fundamental programming paradigms (functional, object-oriented, and metaprogramming); and powerful techniques for debugging and optimising your code. By reading this book, you will learn: The difference between an object and its name, and why the distinction is important The important vector data structures, how they fit together, and how you can pull them apart using subsetting The fine details of functions and environments The condition system, which powers messages, warnings, and errors The powerful functional programming paradigm, which can replace many for loops The three most important OO systems: S3, S4, and R6 The tidy eval toolkit for metaprogramming, which allows you to manipulate code and control evaluation Effective debugging techniques that you can deploy, regardless of how your code is run How to find and remove performance bottlenecks The second edition is a comprehensive update: New foundational chapters: "Names and values," "Control flow," and "Conditions" comprehensive coverage of object oriented programming with chapters on S3, S4, R6, and how to choose between them Much deeper coverage of metaprogramming, including the new tidy evaluation framework use of new package like rlang (http://rlang.r-lib.org), which provides a clean interface to low-level operations, and purr (http://purrr.tidyverse.org/) for functional programming Use of color in code chunks and figures Hadley Wickham is Chief Scientist at RStudio, an Adjunct Professor at Stanford University and the University of Auckland, and a member of the R Foundation. He is the lead developer of the tidyverse, a collection of R packages, including ggplot2 and dplyr, designed to support data science. He is also the author of R for Data Science (with Garrett Grolemund), R Packages, and ggplot2: Elegant Graphics for Data Analysis.
To write an accomplished program in the DATA step of SAS (R), programmers must understand programming logic and know how to implement and even create their own programming algorithm. Handbook of SAS (R) DATA Step Programming shows readers how best to manage and manipulate data by using the DATA step. The book helps novices avoid common mistakes resulting from a lack of understanding fundamental and unique SAS programming concepts. It explains that learning syntax does not solve all problems; rather, a thorough comprehension of SAS processing is needed for successful programming. The author also guides readers through a programming task. In most of the examples, the author first presents strategies and steps for solving the problem, then offers a solution, and finally gives a more detailed explanation of the solution. Understanding the DATA steps, particularly the program data vector (PDV), is critical to proper data manipulation and management in SAS. This book helps SAS programmers thoroughly grasp the concept of DATA step processing and write accurate programs in the DATA step. Numerous supporting materials, including data sets and programs used in the text, are available on the book's CRC Press web page.
While teaching the Numerical Methods for Engineers course over the last 15 years, the author found a need for a new textbook, one that was less elementary, provided applications and problems better suited for chemical engineers, and contained instruction in Visual Basic (R) for Applications (VBA). This led to six years of developing teaching notes that have been enhanced to create the current textbook, Numerical Methods for Chemical Engineers Using Excel (R), VBA, and MATLAB (R). Focusing on Excel gives the advantage of it being generally available, since it is present on every computer-PC and Mac-that has Microsoft Office installed. The VBA programming environment comes with Excel and greatly enhances the capabilities of Excel spreadsheets. While there is no perfect programming system, teaching this combination offers knowledge in a widely available program that is commonly used (Excel) as well as a popular academic software package (MATLAB). Chapters cover nonlinear equations, Visual Basic, linear algebra, ordinary differential equations, regression analysis, partial differential equations, and mathematical programming methods. Each chapter contains examples that show in detail how a particular numerical method or programming methodology can be implemented in Excel and/or VBA (or MATLAB in chapter 10). Most of the examples and problems presented in the text are related to chemical and biomolecular engineering and cover a broad range of application areas including thermodynamics, fluid flow, heat transfer, mass transfer, reaction kinetics, reactor design, process design, and process control. The chapters feature "Did You Know" boxes, used to remind readers of Excel features. They also contain end-of-chapter exercises, with solutions provided.
An authoritative introduction to the latest comparative methods in evolutionary biology Phylogenetic comparative methods are a suite of statistical approaches that enable biologists to analyze and better understand the evolutionary tree of life, and shed vital new light on patterns of divergence and common ancestry among all species on Earth. This textbook shows how to carry out phylogenetic comparative analyses in the R statistical computing environment. Liam Revell and Luke Harmon provide an incisive conceptual overview of each method along with worked examples using real data and challenge problems that encourage students to learn by doing. By working through this book, students will gain a solid foundation in these methods and develop the skills they need to interpret patterns in the tree of life. Covers every major method of modern phylogenetic comparative analysis in R Explains the basics of R and discusses topics such as trait evolution, diversification, trait-dependent diversification, biogeography, and visualization Features a wealth of exercises and challenge problems Serves as an invaluable resource for students and researchers, with applications in ecology, evolution, anthropology, disease transmission, conservation biology, and a host of other areas Written by two of today's leading developers of phylogenetic comparative methods
The statistical analyses that students of the life-sciences are being expected to perform are becoming increasingly advanced. Whether at the undergraduate, graduate, or post-graduate level, this book provides the tools needed to properly analyze your data in an efficient, accessible, plainspoken, frank, and occasionally humorous manner, ensuring that readers come away with the knowledge of which analyses they should use and when they should use them. The book uses the statistical language R, which is the choice of ecologists worldwide and is rapidly becoming the 'go-to' stats program throughout the life-sciences. Furthermore, by using a single, real-world dataset throughout the book, readers are encouraged to become deeply familiar with an imperfect but realistic set of data. Indeed, early chapters are specifically designed to teach basic data manipulation skills and build good habits in preparation for learning more advanced analyses. This approach also demonstrates the importance of viewing data through different lenses, facilitating an easy and natural progression from linear and generalized linear models through to mixed effects versions of those same analyses. Readers will also learn advanced plotting and data-wrangling techniques, and gain an introduction to writing their own functions. Applied Statistics with R is suitable for senior undergraduate and graduate students, professional researchers, and practitioners throughout the life-sciences, whether in the fields of ecology, evolution, environmental studies, or computational biology.
*When R creates copies, and how it affects memory usage and code performance *Everything you could ever want to know about functions *The differences between calling and exiting handlers *How to employ functional programming to solve modular tasks *The motivation, mechanics, usage, and limitations of R's highly pragmatic S3 OO system *The R6 OO system, which is more like OO programming in other languages *The rules that R uses to parse and evaluate expressions *How to use metaprogramming to generate HTML or LaTeX with elegant R code *How to identify and resolve performance bottlenecks
The book deals with functions of many variables: differentiation and integration, extrema with a number of digressions to related subjects such as curves, surfaces and Morse theory. The background needed for understanding the examples and how to compute in Mathematica (R) will also be discussed.
This book constitutes the refereed proceedings of the 15th Conference on Computability in Europe, CiE 2019, held in Durham, UK, in July 2019. The 20 revised full papers presented were carefully reviewed and selected from 35 submissions. In addition, this volume includes 7 invited papers. The conference CiE 2018 had the following six special sessions: computational neuroscience, history and philosophy of computing, lowness notions in computability, probabilistic programming and higher-order computation, smoothed and probabilistic analysis of algorithms, and transnite computations.
Complex Survey Data Analysis with SAS (R) is an invaluable resource for applied researchers analyzing data generated from a sample design involving any combination of stratification, clustering, unequal weights, or finite population correction factors. After clearly explaining how the presence of these features can invalidate the assumptions underlying most traditional statistical techniques, this book equips readers with the knowledge to confidently account for them during the estimation and inference process by employing the SURVEY family of SAS/STAT (R) procedures. The book offers comprehensive coverage of the most essential topics, including: Drawing random samples Descriptive statistics for continuous and categorical variables Fitting and interpreting linear and logistic regression models Survival analysis Domain estimation Replication variance estimation methods Weight adjustment and imputation methods for handling missing data The easy-to-follow examples are drawn from real-world survey data sets spanning multiple disciplines, all of which can be downloaded for free along with syntax files from the author's website: http://mason.gmu.edu/~tlewis18/. While other books may touch on some of the same issues and nuances of complex survey data analysis, none features SAS exclusively and as exhaustively. Another unique aspect of this book is its abundance of handy workarounds for certain techniques not yet supported as of SAS Version 9.4, such as the ratio estimator for a total and the bootstrap for variance estimation. Taylor H. Lewis is a PhD graduate of the Joint Program in Survey Methodology at the University of Maryland, College Park, and an adjunct professor in the George Mason University Department of Statistics. An avid SAS user for 15 years, he is a SAS Certified Advanced programmer and a nationally recognized SAS educator who has produced dozens of papers and workshops illustrating how to efficiently and effectively conduct statistical analyses using SAS. |
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