*Systematically introducing major components of SPM process. *Novel hybrid methods (228 hybrids plus numerous variants) of modern statistical methods or machine learning methods with mathematical and/or univariate geostatistical methods. *Novel predictive accuracy-based variable selection techniques for spatial predictive methods. *Predictive accuracy-based parameter/model optimization. *Reproducible examples for SPM of various data types in R.

Improve Your Analytical Skills Incorporating the latest R packages as well as new case studies and applications, Using R and RStudio for Data Management, Statistical Analysis, and Graphics, Second Edition covers the aspects of R most often used by statistical analysts. New users of R will find the book's simple approach easy to understand while more sophisticated users will appreciate the invaluable source of task-oriented information. New to the Second Edition The use of RStudio, which increases the productivity of R users and helps users avoid error-prone cut-and-paste workflows New chapter of case studies illustrating examples of useful data management tasks, reading complex files, making and annotating maps, "scraping" data from the web, mining text files, and generating dynamic graphics New chapter on special topics that describes key features, such as processing by group, and explores important areas of statistics, including Bayesian methods, propensity scores, and bootstrapping New chapter on simulation that includes examples of data generated from complex models and distributions A detailed discussion of the philosophy and use of the knitr and markdown packages for R New packages that extend the functionality of R and facilitate sophisticated analyses Reorganized and enhanced chapters on data input and output, data management, statistical and mathematical functions, programming, high-level graphics plots, and the customization of plots Easily Find Your Desired Task Conveniently organized by short, clear descriptive entries, this edition continues to show users how to easily perform an analytical task in R. Users can quickly find and implement the material they need through the extensive indexing, cross-referencing, and worked examples in the text. Datasets and code are available for download on a supplementary website.

* Provides a comprehensive review of methods and applications of Bayesian variable selection. * Divided into four parts: Spike-and-Slab Priors; Continuous Shrinkage Priors; Extensions to various Modeling; Other Approaches to Bayesian Variable Selection. * Covers theoretical and methodological aspects, as well as worked out examples with R code provided in the online supplement. * Includes contributions by experts in the field.

R Visualizations: Derive Meaning from Data focuses on one of the two major topics of data analytics: data visualization, a.k.a., computer graphics. In the book, major R systems for visualization are discussed, organized by topic and not by system. Anyone doing data analysis will be shown how to use R to generate any of the basic visualizations with the R visualization systems. Further, this book introduces the author's lessR system, which always can accomplish a visualization with less coding than the use of other systems, sometimes dramatically so, and also provides accompanying statistical analyses. Key Features Presents thorough coverage of the leading R visualization system, ggplot2. Gives specific guidance on using base R graphics to attain visualizations of the same quality as those provided by ggplot2. Shows how to create a wide range of data visualizations: distributions of categorical and continuous variables, many types of scatterplots including with a third variable, time series, and maps. Inclusion of the various approaches to R graphics organized by topic instead of by system. Presents the recent work on interactive visualization in R. David W. Gerbing received his PhD from Michigan State University in 1979 in quantitative analysis, and currently is a professor of quantitative analysis in the School of Business at Portland State University. He has published extensively in the social and behavioral sciences with a focus on quantitative methods. His lessR package has been in development since 2009.

An introduction to the Central Dogma of molecular biology and information flow in biological systems. A systematic overview of the methods for generating gene expression data. Background knowledge on statistical modeling and machine learning techniques. Detailed methodology of analyzing gene expression data with an example case study. Clustering methods for finding co-expression patterns from microarray, bulkRNA and scRNA data. A large number of practical tools, systems and repositories that are useful for computational biologists to create, analyze and validate biologically relevant gene expression patterns. Suitable for multi-disciplinary researchers and practitioners in computer science and biological sciences.

Behavior Analysis with Machine Learning Using R introduces machine learning and deep learning concepts and algorithms applied to a diverse set of behavior analysis problems. It focuses on the practical aspects of solving such problems based on data collected from sensors or stored in electronic records. The included examples demonstrate how to perform common data analysis tasks such as: data exploration, visualization, preprocessing, data representation, model training and evaluation. All of this, using the R programming language and real-life behavioral data. Even though the examples focus on behavior analysis tasks, the covered underlying concepts and methods can be applied in any other domain. No prior knowledge in machine learning is assumed. Basic experience with R and basic knowledge in statistics and high school level mathematics are beneficial. Features: Build supervised machine learning models to predict indoor locations based on WiFi signals, recognize physical activities from smartphone sensors and 3D skeleton data, detect hand gestures from accelerometer signals, and so on. Program your own ensemble learning methods and use Multi-View Stacking to fuse signals from heterogeneous data sources. Use unsupervised learning algorithms to discover criminal behavioral patterns. Build deep learning neural networks with TensorFlow and Keras to classify muscle activity from electromyography signals and Convolutional Neural Networks to detect smiles in images. Evaluate the performance of your models in traditional and multi-user settings. Build anomaly detection models such as Isolation Forests and autoencoders to detect abnormal fish behaviors. This book is intended for undergraduate/graduate students and researchers from ubiquitous computing, behavioral ecology, psychology, e-health, and other disciplines who want to learn the basics of machine learning and deep learning and for the more experienced individuals who want to apply machine learning to analyze behavioral data.

Coherent treatment of a variety of approaches to multiple comparisons Broad coverage of topics, with contributions by internationally leading experts Detailed treatment of applications in medicine and life sciences Suitable for researchers, lecturers / students, and practitioners

Data Analytics for the Social Sciences is an introductory, graduate-level treatment of data analytics for social science. It features applications in the R language, arguably the fastest growing and leading statistical tool for researchers. The book starts with an ethics chapter on the uses and potential abuses of data analytics. Chapters 2 and 3 show how to implement a broad range of statistical procedures in R. Chapters 4 and 5 deal with regression and classification trees and with random forests. Chapter 6 deals with machine learning models and the "caret" package, which makes available to the researcher hundreds of models. Chapter 7 deals with neural network analysis, and Chapter 8 deals with network analysis and visualization of network data. A final chapter treats text analysis, including web scraping, comparative word frequency tables, word clouds, word maps, sentiment analysis, topic analysis, and more. All empirical chapters have two "Quick Start" exercises designed to allow quick immersion in chapter topics, followed by "In Depth" coverage. Data are available for all examples and runnable R code is provided in a "Command Summary". An appendix provides an extended tutorial on R and RStudio. Almost 30 online supplements provide information for the complete book, "books within the book" on a variety of topics, such as agent-based modeling. Rather than focusing on equations, derivations, and proofs, this book emphasizes hands-on obtaining of output for various social science models and how to interpret the output. It is suitable for all advanced level undergraduate and graduate students learning statistical data analysis.

The idea of the Grobner basis first appeared in a 1927 paper by F. S. Macaulay, who succeeded in creating a combinatorial characterization of the Hilbert functions of homogeneous ideals of the polynomial ring. Later, the modern definition of the Grobner basis was independently introduced by Heisuke Hironaka in 1964 and Bruno Buchberger in 1965. However, after the discovery of the notion of the Grobner basis by Hironaka and Buchberger, it was not actively pursued for 20 years. A breakthrough was made in the mid-1980s by David Bayer and Michael Stillman, who created the Macaulay computer algebra system with the help of the Grobner basis. Since then, rapid development on the Grobner basis has been achieved by many researchers, including Bernd Sturmfels.

This book serves as a standard bible of the Grobner basis, for which the harmony of theory, application, and computation are indispensable. It provides all the fundamentals for graduate students to learn the ABC s of the Grobner basis, requiring no special knowledgeto understand those basic points.

Starting from the introductory performance of the Grobner basis (Chapter 1), a trip around mathematical software follows (Chapter 2). Then comes a deep discussion of how to compute the Grobner basis (Chapter 3). These three chapters may be regarded as the first act of a mathematical play. The second act opens with topics on algebraic statistics (Chapter 4), a fascinating research area where the Grobner basis of a toric ideal is a fundamental tool of the Markov chain Monte Carlo method. Moreover, the Grobner basis of a toric ideal has had a great influence on the study of convex polytopes (Chapter 5). In addition, the Grobner basis of the ring of differential operators gives effective algorithms on holonomic functions (Chapter 6). The third act (Chapter 7) is a collection of concrete examples and problems for Chapters 4, 5 and 6 emphasizing computation by using various software systems."

A Strong Practical Focus on Applications and AlgorithmsComputational Statistics Handbook with MATLAB (R), Third Edition covers today's most commonly used techniques in computational statistics while maintaining the same philosophy and writing style of the bestselling previous editions. The text keeps theoretical concepts to a minimum, emphasizing the implementation of the methods. New to the Third EditionThis third edition is updated with the latest version of MATLAB and the corresponding version of the Statistics and Machine Learning Toolbox. It also incorporates new sections on the nearest neighbor classifier, support vector machines, model checking and regularization, partial least squares regression, and multivariate adaptive regression splines. Web ResourceThe authors include algorithmic descriptions of the procedures as well as examples that illustrate the use of algorithms in data analysis. The MATLAB code, examples, and data sets are available online.

Focused on practical matters: this book will not cover Shiny concepts, but practical tools and methodologies to use for production. Based on experience: this book will be a formalization of several years of experience building Shiny applications. Original content: this book will present new methodology and tooling, not just do a review of what already exists.

The fun and friendly guide to mastering IBM's Statistical Package for the Social Sciences Written by an author team with a combined 55 years of experience using SPSS, this updated guide takes the guesswork out of the subject and helps you get the most out of using the leader in predictive analysis. Covering the latest release and updates to SPSS 27.0, and including more than 150 pages of basic statistical theory, it helps you understand the mechanics behind the calculations, perform predictive analysis, produce informative graphs, and more. You'll even dabble in programming as you expand SPSS functionality to suit your specific needs. Master the fundamental mechanics of SPSS Learn how to get data into and out of the program Graph and analyze your data more accurately and efficiently Program SPSS with Command Syntax Get ready to start handling data like a pro--with step-by-step instruction and expert advice!

Little known to many, R works just as well with JavaScript-this book delves into the various ways both languages can work together. The ultimate aim of this work is to put the reader at ease with inviting JavaScript in their data science workflow. In that respect the book is not teaching one JavaScript but rather we show how little JavaScript can greatly support and enhance R code. Therefore, the focus is on integrating external JavaScript libraries and no prior knowledge of JavaScript is required. Key Features: Easy to pick up. An entry way to learning JavaScript for R. Covers topics not covered anywhere else. Easy to follow along.

Little known to many, R works just as well with JavaScript-this book delves into the various ways both languages can work together. The ultimate aim of this work is to put the reader at ease with inviting JavaScript in their data science workflow. In that respect the book is not teaching one JavaScript but rather we show how little JavaScript can greatly support and enhance R code. Therefore, the focus is on integrating external JavaScript libraries and no prior knowledge of JavaScript is required. Key Features: Easy to pick up. An entry way to learning JavaScript for R. Covers topics not covered anywhere else. Easy to follow along.

This book primarily addresses the optimality aspects of covariate designs. A covariate model is a combination of ANOVA and regression models. Optimal estimation of the parameters of the model using a suitable choice of designs is of great importance; as such choices allow experimenters to extract maximum information for the unknown model parameters. The main emphasis of this monograph is to start with an assumed covariate model in combination with some standard ANOVA set-ups such as CRD, RBD, BIBD, GDD, BTIBD, BPEBD, cross-over, multi-factor, split-plot and strip-plot designs, treatment control designs, etc. and discuss the nature and availability of optimal covariate designs. In some situations, optimal estimations of both ANOVA and the regression parameters are provided. Global optimality and D-optimality criteria are mainly used in selecting the design. The standard optimality results of both discrete and continuous set-ups have been adapted, and several novel combinatorial techniques have been applied for the construction of optimum designs using Hadamard matrices, the Kronecker product, Rao-Khatri product, mixed orthogonal arrays to name a few.

"MATLAB By Example" guides the reader through each step of writing MATLAB programs. The book assumes no previous programming experience on the part of the reader, and uses multiple examples in clear language to introduce concepts and practical tools. Straightforward and detailed instructions allow beginners to learn and develop their MATLAB skills quickly.

The book consists of ten chapters, discussing in detail the integrated development environment (IDE), scalars, vectors, arrays, adopting structured programming style using functions and recursive functions, control flow, debugging, profiling, and structures. A chapter also describes Symbolic Math Toolbox, teaching readers how to solve algebraic equations, differentiation, integration, differential equations, and Laplace and Fourier transforms. Containing hundreds of examples illustrated using screen shots, hundreds of exercises, and three projects, this book can be used to complement coursework or as a self-study book, and can be used as a textbook in universities, colleges and high schools.
No programming experience necessary to learn MATLABExamples with screenshots and plentiful exercises throughout help make MATLAB easy to understandProjects enable readers to write long MATLAB programs, and take the first step toward being a professional MATLAB programmer

Progressively more and more attention has been paid to how location affects health outcomes. The area of disease mapping focusses on these problems, and the Bayesian paradigm has a major role to play in the understanding of the complex interplay of context and individual predisposition in such studies of disease. Using R for Bayesian Spatial and Spatio-Temporal Health Modeling provides a major resource for those interested in applying Bayesian methodology in small area health data studies. Features: Review of R graphics relevant to spatial health data Overview of Bayesian methods and Bayesian hierarchical modeling as applied to spatial data Bayesian Computation and goodness-of-fit Review of basic Bayesian disease mapping models Spatio-temporal modeling with MCMC and INLA Special topics include multivariate models, survival analysis, missing data, measurement error, variable selection, individual event modeling, and infectious disease modeling Software for fitting models based on BRugs, Nimble, CARBayes and INLA Provides code relevant to fitting all examples throughout the book at a supplementary website The book fills a void in the literature and available software, providing a crucial link for students and professionals alike to engage in the analysis of spatial and spatio-temporal health data from a Bayesian perspective using R. The book emphasizes the use of MCMC via Nimble, BRugs, and CARBAyes, but also includes INLA for comparative purposes. In addition, a wide range of packages useful in the analysis of geo-referenced spatial data are employed and code is provided. It will likely become a key reference for researchers and students from biostatistics, epidemiology, public health, and environmental science.

This book provides hands-on guidance for researchers and practitioners in criminal justice and criminology to perform statistical analyses and data visualization in the free and open-source software R. It offers a step-by-step guide for beginners to become familiar with the RStudio platform and tidyverse set of packages. This volume will help users master the fundamentals of the R programming language, providing tutorials in each chapter that lay out research questions and hypotheses centering around a real criminal justice dataset, such as data from the National Survey on Drug Use and Health, National Crime Victimization Survey, Youth Risk Behavior Surveillance System, The Monitoring the Future Study, and The National Youth Survey. Users will also learn how to manipulate common sources of agency data, such as calls-for-service (CFS) data. The end of each chapter includes exercises that reinforce the R tutorial examples, designed to help master the software as well as to provide practice on statistical concepts, data analysis, and interpretation of results. The text can be used as a stand-alone guide to learning R or it can be used as a companion guide to an introductory statistics textbook, such as Basic Statistics in Criminal Justice (2020).

Physically Unclonable Functions (PUFs) translate unavoidable variations in certain parameters of materials, waves, or devices into random and unique signals. They have found many applications in the Internet of Things (IoT), authentication systems, FPGA industry, several other areas in communications and related technologies, and many commercial products. Statistical Trend Analysis of Physically Unclonable Functions first presents a review on cryptographic hardware and hardware-assisted cryptography. The review highlights PUF as a mega trend in research on cryptographic hardware design. Afterwards, the authors present a combined survey and research work on PUFs using a systematic approach. As part of the survey aspect, a state-of-the-art analysis is presented as well as a taxonomy on PUFs, a life cycle, and an established ecosystem for the technology. In another part of the survey, the evolutionary history of PUFs is examined, and strategies for further research in this area are suggested. In the research side, this book presents a novel approach for trend analysis that can be applied to any technology or research area. In this method, a text mining tool is used which extracts 1020 keywords from the titles of the sample papers. Then, a classifying tool classifies the keywords into 295 meaningful research topics. The popularity of each topic is then numerically measured and analyzed over the course of time through a statistical analysis on the number of research papers related to the topic as well as the number of their citations. The authors identify the most popular topics in four different domains; over the history of PUFs, during the recent years, in top conferences, and in top journals. The results are used to present an evolution study as well as a trend analysis and develop a roadmap for future research in this area. This method gives an automatic popularity-based statistical trend analysis which eliminates the need for passing personal judgments about the direction of trends, and provides concrete evidence to the future direction of research on PUFs. Another advantage of this method is the possibility of studying a whole lot of existing research works (more than 700 in this book). This book will appeal to researchers in text mining, cryptography, hardware security, and IoT.

Review of the First Edition: The authors strive to reduce theory to a minimum, which makes it a self-learning text that is comprehensible for biologists, physicians, etc. who lack an advanced mathematics background. Unlike in many other textbooks, R is not introduced with meaningless toy examples; instead the reader is taken by the hand and shown around some analyses, graphics, and simulations directly relating to meta-analysis... A useful hands-on guide for practitioners who want to familiarize themselves with the fundamentals of meta-analysis and get started without having to plough through theorems and proofs. -Journal of Applied Statistics Statistical Meta-Analysis with R and Stata, Second Edition provides a thorough presentation of statistical meta-analyses (MA) with step-by-step implementations using R/Stata. The authors develop analysis step by step using appropriate R/Stata functions, which enables readers to gain an understanding of meta-analysis methods and R/Stata implementation so that they can use these two popular software packages to analyze their own meta-data. Each chapter gives examples of real studies compiled from the literature. After presenting the data and necessary background for understanding the applications, various methods for analyzing meta-data are introduced. The authors then develop analysis code using the appropriate R/Stata packages and functions. What's New in the Second Edition: Adds Stata programs along with the R programs for meta-analysis Updates all the statistical meta-analyses with R/Stata programs Covers fixed-effects and random-effects MA, meta-regression, MA with rare-event, and MA-IPD vs MA-SS Adds five new chapters on multivariate MA, publication bias, missing data in MA, MA in evaluating diagnostic accuracy, and network MA Suitable as a graduate-level text for a meta-data analysis course, the book is also a valuable reference for practitioners and biostatisticians (even those with little or no experience in using R or Stata) in public health, medical research, governmental agencies, and the pharmaceutical industry.

This version replaces R with Python to make it accessible to a greater number of users outside of statistics including those from Machine Learning. A reader coming to this book from an ML background will learn new statistical perspectives on learning from data. Topics include Model Selection, Shrinkage, Experiments with Blocks and Missing Data. Includes an Appendix on Python for beginners.

Simple English format Foundation sections on inference and evidence, and data integration in project management Exploration of R usage through a narrative examining a generic integrated conservation and development project A final section on R for reproducible workflow Accompanied by an R package

This introductory textbook presents research methods and data analysis tools in non-technical language. It explains the research process and the basics of qualitative and quantitative data analysis, including procedures and methods, analysis, interpretation, and applications using hands-on data examples in QDA Miner Lite and IBM SPSS Statistics software. The book is divided into four parts that address study and research design; data collection, qualitative methods and surveys; statistical methods, including hypothesis testing, regression, cluster and factor analysis; and reporting. The intended audience is business and social science students learning scientific research methods, however, given its business context, the book will be equally useful for decision-makers in businesses and organizations.