This book provides a comprehensive account of past, present and future of the biomass based biorefineries. It is an all-inclusive and insightful compilation of recent advancements in the technology and methods used for conversion of biomass to bioenergy and other useful biochemicals. The book also focuses on the limitations of existing technologies and provides the future prospects, as well as discusses socio-economic impact of biomass based biorefineries. This book assists researchers in the area of lignocellulosic biorefineries and can be used by the students, scientist and academician as an advanced reference textbook.

Macrocyclic lactones are chemical compounds that represent the main treatment for parasitic diseases of animals, not only for helminth infections, but also a number of major ectoparasitic infestations. There has been no comprehensive book on this subject for more than a decade and this book fills this gap and provides detailed coverage of the basic science of these drugs and their mode of action, as well as their clinical use in farm and companion animals and in humans.

This book provides up-to-date information on the state of the art in applications of biotechnological and microbiological tools for protecting the environment. Written by leading international experts, it discusses potential applications of biotechnological and microbiological techniques in solid waste management, wastewater treatment, agriculture, energy and environmental health. This second volume of book "Environmental Microbiology and Biotechnology," covers two main topics: bioenergy and environmental health, exploring the latest developments from around the globe regarding applications of biotechnology and microbiology for converting wastes into valuable products and at the same time reducing the environmental pollution resulting from disposal. Wherever possible it also includes real-world examples. Further, it offers advice on which procedures should be followed to achieve satisfactory results, and provides insights that will promote the transition to the sustainable utilization of various waste products.

This book compiles the latest research on the multifarious roles of microbial enzymes, and provides an overview of microbial enzymes and biotechnologies. It discusses the use of microbial enzymes in innovative areas like nanomedicine and synthetic biotechnology, as well as the use of starch digesting enzymes and bioactive proteins as biotherapeutics, all of which have applications in modern drug discovery processes. The book also examines the concept of microbial biotransformation and protein engineering, and covers topics such as the immobilization of therapeutic enzymes, bioengineering of enzymes for bioactive compounds, the production of hydrolytic and oxidative enzymes from plant raw materials, and prebiotics and probiotics. Given its multidisciplinary scope, this book will appeal to researchers and industry experts in the fields of microbiology, biotechnology and molecular medicine.

Fuelled by the application of omics and reverse genetics technologies, impressive progress has been achieved in the field of molecular and cellular biology of Bunyaviridae in recent years. In this book, a panel of international experts review the most important findings, providing a timely and coherent overview of the field. All five genera - i.e. Orthobunyavirus, Hantavirus, Nairovirus, Plebovirus, and Tospovirus - are covered in separate chapters. Genetics and the evolution of hantaviruses are given a special treatment. Additionally, current advances in diagnostics are reviewed in detail. The book closes with an excellent overview of the remaining challenges and future prospects in this fascinating field. It will be essential reading for everyone working on bunyaviruses and related viruses and is a recommended text for all virology libraries.

The book will benefit a reader with a background in physical sciences and applied mathematics interested in the mathematical models of genetic evolution. In the first chapter, we analyze several thought experiments based on a basic model of stochastic evolution of a single genomic site in the presence of the factors of random mutation, directional natural selection, and random genetic drift. In the second chapter, we present a more advanced theory for a large number of linked loci. In the third chapter, we include the effect of genetic recombination into account and find out the advantage of sexual reproduction for adaptation. These models are useful for the evolution of a broad range of asexual and sexual populations, including virus evolution in a host and a host population.

The book provides the readers of various discipline an easy understanding of the latest biophysical techniques pertaining to microbiology. Biofilm associated chronic infection is a major health problem and a serious concern to doctors, scientists and other health workers as it develops antibiotic and multi-drug resistance. This book describes various protocols utilized in the detection of the biofilm. The book has been divided into six sub sections which provides pertinent information about the various biophysical techniques and instruments that are used for detecting and analyzing the biofilm formation upon biotic and abiotic surfaces. The readers will be able to identify the techniques that can best cater information to solve the problem at hand. This book attempts to compile the latest information on the recent advances in the various functional aspects of microbial biofilms, their pathogenesis, present day treatments as well as detection strategies. This book is meant for researchers in the field of microbiology and interested in understanding microbial pathogenesis, quorum sensing and biofilm formation.

This book provides a comprehensive overview of the current state of knowledge on plant-microbiome interactions and associations. It covers all major mechanistic approaches used to investigate microbes' impacts on plant growth promotion, disease control and health. The industrial manufacture of nitrogen currently accounts for roughly 2% of the world's total energy consumption. Microbial products are expected to reduce the need for costly fertilizers, as well as chemical pesticides and fungicides. While beneficial microorganisms are increasingly being used in agriculture, abiotic and biotic stresses such as heat, drought, cold, and salt can quickly kill or render them useless in the field. However, discovering new and better treatments is a lengthy process due to the considerable microbial diversity found in soils. Researchers have now proposed using biotechnological approaches to accelerate the process of microbial technology development. The fact that plant-associated microbes stimulate plant growth and development is well known, as the examples of rhizobia and mycorrhizal fungi show. The mechanisms by which these microorganisms maintain plant growth include the production of phytohormones, fixation of nitrogen, and the mobilization of phosphorus and minerals. The plant microbiome is also involved in pathogen suppression, and especially the root microbiome acts as a protective shield against soil-borne pathogens. A special feature of this book is its multidisciplinary approach, spanning from plant microbiology/biocontrol, fungal and bacterial endophytes, plant physiology, to biochemistry, proteomics and genomics. It is ideally suited for researchers and student of agri-biotechnology, soil biology and fungal biology.

The rapidly expanding molecular biological techniques and approaches have significant impact on microbial biotechnology, hence the need for the addition of four new chapters in the third edition of this textbook - "Chapter 3: Application of 'Omics' Technologies in Microbial Fermentation", "Chapter 5: Microbial Genome Mining for Identifying Antimicrobial Targets", "Chapter 21: Bacterial Biofilm: Molecular Characterization and Impacts on Water Management" and "Chapter 23: Microbial Biomining". "Chapter 15: Transgenic Plants" has been completely revised while most of the other chapters have been thoroughly updated in this new edition.There already exist a number of excellent general textbooks on microbiology and biotechnology that deal with the basic principles of microbial biotechnology. To complement them, this book focuses on the various applications of microbial-biotechnological principles. A teaching-based format is adopted, whereby working problems, as well as answers to frequently asked questions, supplement the main text. The book also includes real life examples of how the application of microbial-biotechnological principles has achieved breakthroughs in both research and industrial production.Although written for polytechnic students and undergraduates, the book contains sufficient information to be used as a reference for postgraduate students and lecturers. It may also serve as a resource book for corporate planners, managers and applied research personnel.

Metagenomics is one of the fastest advancing fields in biology. By permitting access to the genomes of entire communities of bacteria, viruses, and fungi - otherwise inaccessible - metagenomics is extending our comprehension of the diversity, ecology, evolution, and functioning of the microbial world, as well as contributing to the emergence of new applications in many different areas. The continual and dynamical development of faster sequencing techniques, together with the advancement of methods to cope with the exponentially increasing amount of data generated, are expanding our capacity for the analysis of microbial communities from an unlimited variety of habitats and environments. The synergism with the new emerging omics approaches is showing the path to functional metagenomics and to adopting integrative, wider viewpoints, like systems biology. This book covers the most innovative and recent advances in theoretical, methodological, and applied areas of metagenomics. The topics covered include: metagenomics integration with complementary technologies * bacterial genealogy * viral metagenomics * the regulation of prokaryotic communities * functional metagenomics * systems biology * next-generation sequencing * stable isotope probing * DNA sequencing of uncultured microbes * cyberinfrastructure resource * identification of novel viruses * metagenomics of fungal communities * the human microbiome * microbial bioremediation * metagenomic enzyme discovery * quorum-sensing * plant-pathogen interactions * metagenomics of belowground microbial communities. The book is aimed at researchers and environmental managers involved in metagenomics, students starting research in this field, and teachers interested in the new developments.

The increased demand due to anthropogenic activity leads to emerging contaminants, resulting in a substantial environmental hazard. The long-term presence and exposure of contaminants lead to severe negative impacts on the environment, humans, and other life forms. Hence, emerging contaminants in the environment is a worldwide concern, and new technologies to mitigate these contaminants are being developed. This book covers the source, occurrence, toxicity, and detection techniques of a wide range of emerging contaminants. This collection also discusses the scope and applications of diverse techniques, including Bio/Phyto and Nano-remediation technologies, to mitigate the emerging contaminants; along with their sustainability issue and prospects. As a result, this book appears to provide insight into several modern and environmentally friendly waste management options, the possibility to minimize and lessen the effects of contaminants, and striving to lower toxicological endpoints to assure environmental safety. This book delivers the most recent advancements by prominent specialists in environmental sciences to academics, researchers, students, and practitioners interested in the identification and eradication of emerging pollutants from the environment.

Due to the huge quantity and diverse nature of their metabolic pathways, fungi have great potential to be used for the production of different biofuels such as bioethanol, biobutanol, and biodiesel. This book presents recent advances, as well as challenges and promises, of fungal applications in biofuel production, subsequently discussing plant pathogenic fungi for bioethanol and biodiesel production, including their mechanisms of action. Additionally, this book reviews biofuel production using plant endophytic fungi, wood-rotting fungi, fungal biocontrol agents, and gut fungi, and it investigates highly efficient fungi for biofuel production and process design in fungal-based biofuel production systems. Finally, life cycle assessment of fungal-based biofuel production systems are discussed in this volume.

Microorganisms that convert gaseous nitrogen (N2) to a form suitable for use by living organisms are pivotal for life on Earth. Another set of microbial reactions utilize the bio-available nitrogen creating N2 and completing the cycle. This crucial nutrient cycle has long been the subject of extensive research, and recent advances - in studying the biochemistry, bioinformatics, cell biology, and the physiology of bacterial nitrogen cycling processes, alongside the advent of the omics age - have had a massive impact, enabling us to fully appreciate the sheer diversity of approaches adapted by individual organisms. Research in this area is at a very exciting stage. This timely book provides comprehensive reviews of current nitrogen cycle research and gives a broader perspective on the state of our understanding of this key biogeochemical cycle. With contributions from expert authors from around the world, the topics covered include: the archaean N-cycle * redox complexes N-cycle * organization of respiratory chains in N-cycle processes * Mo-nitrogenase * nitrogen assimilation in bacteria * alternative routes to dinitrogen * nitrite and nitrous oxide reductases * assembly of respiratory proteins * nitric oxide metabolism * denitrification in legume-associated endosymbiotic bacteria * nitrous oxide production in the terrestrial environment * bacterial nitrogen cycling in humans. This book will serve as a valuable reference work for everyone working in this field and will also be of interest to researchers studying symbioses, environmental microbiology, plant metabolism, infection events, and other prokaryote-eukaryote interactions.

This edited volume explores Campylobacter species, which are some of the most important foodborne pathogens. Above all, contaminated poultry meat can cause human gastroenteritis in both developed and developing countries. The respective contributions reveal how these infections can also increase the risk of generalized paralytic diseases such as Guillain-Barre syndrome, Miller-Fisher syndrome, and Chinese paralytic syndrome. Due to their influence on the nervous system, circulatory system, and various organs, Campylobacter infections represent a serious public health concern. Campylobacter can be effectively combated by addressing the hygienic conditions in both food production and human lifestyles. Accordingly, the authors put forward a One Health perspective, which provides readers with essential insights into the basic biology of Campylobacter, as well as practical guidance on aspects ranging from food production to the clinical treatment of infections. Chapters 'Population Biology and Comparative Genomics of Campylobacter Species' and 'Natural Competence and Horizontal Gene Transfer in Campylobacter' are available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

This volume discusses the oral microbiome, and oral and systemic health. The chapters in this book cover topics such as analytical techniques for identifying and measuring oral bacteria; strategies for controlling common sources of variability in oral microbiome methods for viral bacterial and fungal analysis; ways to study oral DNA and RNA samples to identify molecular pathways to disease; approaches to functional assays for oral bacteriophage, antibiotic purging of systemic bacteria; and metaproteomic analysis of various oral samples. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and practical, The Oral Microbiome: Methods and Protocols is a valuable resource for any scientist or researcher looking to further study this exciting and developing field.

The enzymology of milk and other products is of enormous significance for the production and quality of almost every dairy product. Milk itself is a complex biological fluid that contains a wide range of enzymes with diverse activities, some of which have identifiable functions while others are present as an accidental consequence of the mechanism of milk secretion. Over time milk enzymology has become an incredibly essential component of milk and other dairy product production, and with advancing technology and processing techniques, its importance is at its peak. Dairy Enzymology presents an expansive overview of the enzymology of milk and other dairy products, focusing on the use of indigenous and endogenous enzymes in milk and exogenous enzymes in cheese processing. A full section is dedicated to the enzymology of bovine milk, focusing on the main families of indigenous enzymes as well as their potential significance in the mammary gland plus the technological significance for the properties of dairy products. Implications for the manufacture and ripening of cheese plus the use of enzymes such as alkaline phosphatase for measuring heat treatment in milk are explored in full, and the role of milk protease plasmin and other indigenous enzymes in the age-gelation is focused on. Further sections focus on enzymes found in raw milk and enzymes deliberately added for manufacture or modification of properties and the manufacture of food ingredients from dairy-derived ingredients. The key bacterial families are discussed in depth as well as their known contributions to the quality of dairy products. With its comprehensive scope and fully up-to-date coverage of dairy product enzymology, this text is a singular source for researchers looking to understand this essential dairy processing aspect.

This book highlights different natural products that are derived from the plants and microbes that have shown potential as the lead compounds against infectious diseases and cancer. Natural products represent an untapped source of strikingly diverse chemotypes with novel mechanisms of action and the potential to serve as anticancer and anti-infective agents. The book discusses a range of biotechnologically valuable bioactive compounds and secondary metabolites that have been derived from plant and microorganisms from various ecological niches. It also reviews the latest developments in the field of genomics, bioinformatics and industrial fermentation for harnessing the microbial products for commercial applications. In turn, the book's closing section reviews important biotechnological applications of various natural products. Combining the expertise of specialists in this field, the book's goal is to promote the further investigation of natural sources for the development of standardized, safe and effective therapies.

The Central Andean Altiplane represents a unique extreme environment due to its high altitude, closed basins that modulate the salt pans and saline wetlands surrounded by deserts, as well as the considerable influence of volcanic activity. UV radiation, arsenic content, high salinity, alkalinity and low dissolved oxygen levels, together with extreme daily temperature fluctuations and oligotrophic conditions, shape an environment that resembles the early Earth and, even more, extraterrestrial conditions. By developing simple biofilms stratified microbial mats or complex microbialites, extreme microbial ecosystems, colonize and thrived in different environments like salt flats, wetlands, lakes volcano vents, geysers and deserts. This book presents our current understanding of these amazing ecosystems, providing a basis for their protection and sustainable utilization. The main audience for this book included researchers and graduate students as well as professionals working in the government, mining industry and similar activities.