Metagenomics is one of the fastest advancing fields in biology. By permitting access to the genomes of entire communities of bacteria, viruses, and fungi - otherwise inaccessible - metagenomics is extending our comprehension of the diversity, ecology, evolution, and functioning of the microbial world, as well as contributing to the emergence of new applications in many different areas. The continual and dynamical development of faster sequencing techniques, together with the advancement of methods to cope with the exponentially increasing amount of data generated, are expanding our capacity for the analysis of microbial communities from an unlimited variety of habitats and environments. The synergism with the new emerging omics approaches is showing the path to functional metagenomics and to adopting integrative, wider viewpoints, like systems biology. This book covers the most innovative and recent advances in theoretical, methodological, and applied areas of metagenomics. The topics covered include: metagenomics integration with complementary technologies * bacterial genealogy * viral metagenomics * the regulation of prokaryotic communities * functional metagenomics * systems biology * next-generation sequencing * stable isotope probing * DNA sequencing of uncultured microbes * cyberinfrastructure resource * identification of novel viruses * metagenomics of fungal communities * the human microbiome * microbial bioremediation * metagenomic enzyme discovery * quorum-sensing * plant-pathogen interactions * metagenomics of belowground microbial communities. The book is aimed at researchers and environmental managers involved in metagenomics, students starting research in this field, and teachers interested in the new developments.

Published since 1959, "Advances in Applied Microbiology" continues to be one of the most widely read and authoritative review sources in microbiology.
The series contains comprehensive reviews of the most current research in applied microbiology. Recent areas covered include bacterial diversity in the human gut, protozoan grazing of freshwater biofilms, metals in yeast fermentation processes and the interpretation of host-pathogen dialogue through microarrays.
Eclectic volumes are supplemented by thematic volumes on various topics, including Archaea and sick building syndrome. Impact factor for 2008: 1.658.
* Contributions from leading authorities and industry experts
* Informs and updates on all the latest developments in the field
* Reference and guide for scientists and specialists involved in advancements in applied microbiology

The Human Microbiome in Early Life: Implications to Health and Disease presents recent research advances that have highlighted the significance of early life, possibly beginning before birth, in the establishment of both the microbiome and its role in health and disease. The book reviews current knowledge on the origins of the human microbiota in early life, presents exposures which may disturb normal microbial colonization, and covers their implications to the risk of disease. Finally, emerging means to modify the early human microbiome to improve health are discussed.

The increased demand due to anthropogenic activity leads to emerging contaminants, resulting in a substantial environmental hazard. The long-term presence and exposure of contaminants lead to severe negative impacts on the environment, humans, and other life forms. Hence, emerging contaminants in the environment is a worldwide concern, and new technologies to mitigate these contaminants are being developed. This book covers the source, occurrence, toxicity, and detection techniques of a wide range of emerging contaminants. This collection also discusses the scope and applications of diverse techniques, including Bio/Phyto and Nano-remediation technologies, to mitigate the emerging contaminants; along with their sustainability issue and prospects. As a result, this book appears to provide insight into several modern and environmentally friendly waste management options, the possibility to minimize and lessen the effects of contaminants, and striving to lower toxicological endpoints to assure environmental safety. This book delivers the most recent advancements by prominent specialists in environmental sciences to academics, researchers, students, and practitioners interested in the identification and eradication of emerging pollutants from the environment.

The rapidly expanding molecular biological techniques and approaches have significant impact on microbial biotechnology, hence the need for the addition of four new chapters in the third edition of this textbook - "Chapter 3: Application of 'Omics' Technologies in Microbial Fermentation", "Chapter 5: Microbial Genome Mining for Identifying Antimicrobial Targets", "Chapter 21: Bacterial Biofilm: Molecular Characterization and Impacts on Water Management" and "Chapter 23: Microbial Biomining". "Chapter 15: Transgenic Plants" has been completely revised while most of the other chapters have been thoroughly updated in this new edition.There already exist a number of excellent general textbooks on microbiology and biotechnology that deal with the basic principles of microbial biotechnology. To complement them, this book focuses on the various applications of microbial-biotechnological principles. A teaching-based format is adopted, whereby working problems, as well as answers to frequently asked questions, supplement the main text. The book also includes real life examples of how the application of microbial-biotechnological principles has achieved breakthroughs in both research and industrial production.Although written for polytechnic students and undergraduates, the book contains sufficient information to be used as a reference for postgraduate students and lecturers. It may also serve as a resource book for corporate planners, managers and applied research personnel.

Published since 1953, "Advances in Virus Research" covers a diverse range of in-depth reviews providing a valuable overview of the current field of virology. The impact factor for 2007 is 3.120, placing it 9th in the highly competitive category of virology.

* Contributions from leading authorities * Informs and updates on all the latest developments in the field

Microorganisms that convert gaseous nitrogen (N2) to a form suitable for use by living organisms are pivotal for life on Earth. Another set of microbial reactions utilize the bio-available nitrogen creating N2 and completing the cycle. This crucial nutrient cycle has long been the subject of extensive research, and recent advances - in studying the biochemistry, bioinformatics, cell biology, and the physiology of bacterial nitrogen cycling processes, alongside the advent of the omics age - have had a massive impact, enabling us to fully appreciate the sheer diversity of approaches adapted by individual organisms. Research in this area is at a very exciting stage. This timely book provides comprehensive reviews of current nitrogen cycle research and gives a broader perspective on the state of our understanding of this key biogeochemical cycle. With contributions from expert authors from around the world, the topics covered include: the archaean N-cycle * redox complexes N-cycle * organization of respiratory chains in N-cycle processes * Mo-nitrogenase * nitrogen assimilation in bacteria * alternative routes to dinitrogen * nitrite and nitrous oxide reductases * assembly of respiratory proteins * nitric oxide metabolism * denitrification in legume-associated endosymbiotic bacteria * nitrous oxide production in the terrestrial environment * bacterial nitrogen cycling in humans. This book will serve as a valuable reference work for everyone working in this field and will also be of interest to researchers studying symbioses, environmental microbiology, plant metabolism, infection events, and other prokaryote-eukaryote interactions.

This edited volume explores Campylobacter species, which are some of the most important foodborne pathogens. Above all, contaminated poultry meat can cause human gastroenteritis in both developed and developing countries. The respective contributions reveal how these infections can also increase the risk of generalized paralytic diseases such as Guillain-Barre syndrome, Miller-Fisher syndrome, and Chinese paralytic syndrome. Due to their influence on the nervous system, circulatory system, and various organs, Campylobacter infections represent a serious public health concern. Campylobacter can be effectively combated by addressing the hygienic conditions in both food production and human lifestyles. Accordingly, the authors put forward a One Health perspective, which provides readers with essential insights into the basic biology of Campylobacter, as well as practical guidance on aspects ranging from food production to the clinical treatment of infections. Chapters 'Population Biology and Comparative Genomics of Campylobacter Species' and 'Natural Competence and Horizontal Gene Transfer in Campylobacter' are available open access under a Creative Commons Attribution 4.0 International License via link.springer.com.

Published since 1959, "Advances in Applied Microbiology" continues to be one of the most widely read and authoritative review sources in microbiology.
The series contains comprehensive reviews of the most current research in applied microbiology. Recent areas covered include bacterial diversity in the human gut, protozoan grazing of freshwater biofilms, metals in yeast fermentation processes and the interpretation of host-pathogen dialogue through microarrays.
Eclectic volumes are supplemented by thematic volumes on various topics, including Archaea and sick building syndrome. Impact factor for 2007: 1.821.
* Contributions from leading authorities and industry experts
* Informs and updates on all the latest developments in the field
* Reference and guide for scientists and specialists involved in advancements in applied microbiology

Due to the huge quantity and diverse nature of their metabolic pathways, fungi have great potential to be used for the production of different biofuels such as bioethanol, biobutanol, and biodiesel. This book presents recent advances, as well as challenges and promises, of fungal applications in biofuel production, subsequently discussing plant pathogenic fungi for bioethanol and biodiesel production, including their mechanisms of action. Additionally, this book reviews biofuel production using plant endophytic fungi, wood-rotting fungi, fungal biocontrol agents, and gut fungi, and it investigates highly efficient fungi for biofuel production and process design in fungal-based biofuel production systems. Finally, life cycle assessment of fungal-based biofuel production systems are discussed in this volume.

Waterborne Pathogens: Detection Methods and Applications, Second Edition, gives an overview of advanced and emerging technologies in the detection of a range of waterborne pathogens. In addition, the book presents existing methodologies, highlights where improvements can be made, includes applications, and touches on the ways in which new technologies can be applied in water management. Finally, the book addresses issues of sample preparation (from sampling, to concentration and enrichment), a key stage in any detection protocol.

This volume discusses the oral microbiome, and oral and systemic health. The chapters in this book cover topics such as analytical techniques for identifying and measuring oral bacteria; strategies for controlling common sources of variability in oral microbiome methods for viral bacterial and fungal analysis; ways to study oral DNA and RNA samples to identify molecular pathways to disease; approaches to functional assays for oral bacteriophage, antibiotic purging of systemic bacteria; and metaproteomic analysis of various oral samples. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and practical, The Oral Microbiome: Methods and Protocols is a valuable resource for any scientist or researcher looking to further study this exciting and developing field.

"Advances in Microbial Physiology" is one of the most successful and prestigious series from Academic Press, an imprint of Elsevier. It publishes topical and important reviews, interpreting physiology to include all material that contributes to our understanding of how microorganisms and their component parts work.
First published in 1967, it is now in its 55th volume. The Editors have always striven to interpret microbial physiology in the broadest context and have never restricted the contents to traditional views of whole cell physiology. Now edited by Professor Robert Poole, University of Sheffield, "Advances in Microbial Physiology" continues to be an influential and very well reviewed series.
* 2007 impact factor of 4.9, placing it 13th in the highly competitive category of microbiology
* Contributions by leading international scientists
* The latest research in microbial physiology"

Published since 1959, "Advances in Applied Microbiology" continues to be one of the most widely read and authoritative review sources in microbiology.
The series contains comprehensive reviews of the most current research in applied microbiology. Recent areas covered include bacterial diversity in the human gut, protozoan grazing of freshwater biofilms, metals in yeast fermentation processes and the interpretation of host-pathogen dialogue through microarrays.
Eclectic volumes are supplemented by thematic volumes on various topics, including Archaea and sick building syndrome. Impact factor for 2007: 1.821.
* Contributions from leading authorities and industry experts
* Informs and updates on all the latest developments in the field
* Reference and guide for scientists and specialists involved in advancements in applied microbiology

The enzymology of milk and other products is of enormous significance for the production and quality of almost every dairy product. Milk itself is a complex biological fluid that contains a wide range of enzymes with diverse activities, some of which have identifiable functions while others are present as an accidental consequence of the mechanism of milk secretion. Over time milk enzymology has become an incredibly essential component of milk and other dairy product production, and with advancing technology and processing techniques, its importance is at its peak. Dairy Enzymology presents an expansive overview of the enzymology of milk and other dairy products, focusing on the use of indigenous and endogenous enzymes in milk and exogenous enzymes in cheese processing. A full section is dedicated to the enzymology of bovine milk, focusing on the main families of indigenous enzymes as well as their potential significance in the mammary gland plus the technological significance for the properties of dairy products. Implications for the manufacture and ripening of cheese plus the use of enzymes such as alkaline phosphatase for measuring heat treatment in milk are explored in full, and the role of milk protease plasmin and other indigenous enzymes in the age-gelation is focused on. Further sections focus on enzymes found in raw milk and enzymes deliberately added for manufacture or modification of properties and the manufacture of food ingredients from dairy-derived ingredients. The key bacterial families are discussed in depth as well as their known contributions to the quality of dairy products. With its comprehensive scope and fully up-to-date coverage of dairy product enzymology, this text is a singular source for researchers looking to understand this essential dairy processing aspect.

This book highlights different natural products that are derived from the plants and microbes that have shown potential as the lead compounds against infectious diseases and cancer. Natural products represent an untapped source of strikingly diverse chemotypes with novel mechanisms of action and the potential to serve as anticancer and anti-infective agents. The book discusses a range of biotechnologically valuable bioactive compounds and secondary metabolites that have been derived from plant and microorganisms from various ecological niches. It also reviews the latest developments in the field of genomics, bioinformatics and industrial fermentation for harnessing the microbial products for commercial applications. In turn, the book's closing section reviews important biotechnological applications of various natural products. Combining the expertise of specialists in this field, the book's goal is to promote the further investigation of natural sources for the development of standardized, safe and effective therapies.

The Central Andean Altiplane represents a unique extreme environment due to its high altitude, closed basins that modulate the salt pans and saline wetlands surrounded by deserts, as well as the considerable influence of volcanic activity. UV radiation, arsenic content, high salinity, alkalinity and low dissolved oxygen levels, together with extreme daily temperature fluctuations and oligotrophic conditions, shape an environment that resembles the early Earth and, even more, extraterrestrial conditions. By developing simple biofilms stratified microbial mats or complex microbialites, extreme microbial ecosystems, colonize and thrived in different environments like salt flats, wetlands, lakes volcano vents, geysers and deserts. This book presents our current understanding of these amazing ecosystems, providing a basis for their protection and sustainable utilization. The main audience for this book included researchers and graduate students as well as professionals working in the government, mining industry and similar activities.

Mycotoxins are the metabolites of fungus and are reported to contaminate nearly 25% of the food produced worldwide. The mycotoxins of most significance are the aflatoxins due to their severe health implications and their prevalence in food commodities on a larger scale. Aflatoxins are produced by certain species of fungi the most prominent among which are Aspergillus flavus, A. parasiticus and A. nominous. Food commodities of African and South Asian countries are especially reported to have aflatoxins well beyond the allowable limits but due to the global trade of food commodities developed countries are also prone towards the perils of aflatoxins. Moreover, climate changes may have a substantial impact on the distribution and global prevalence of aflatoxins in the near future. The International Agency for Research on Cancer (IARC) has classified the aflatoxins as group 1 category carcinogen. Aflatoxins are also reported as teratogenic, mutagenic, growth retardant, immunosuppressant and may also cause nervous system and reproductive system disorders. Preventive approaches involving good manufacturing from "farm to fork" are the major focus of the current food industry. The aim of our book is to provide readers with the most recent data and up-to-date studies from aflatoxins research, with specific focuses on (i) the impact of aflatoxins on human health, (ii) new approaches by the researchers from different parts of the world to degrade aflatoxins and (iii) potential preventive approaches that can significantly lessen the burden of aflatoxins in food products

Ribonucleic acid (RNA) is a macromolecule that plays a central role in cell physiology: RNA molecules act as intermediates between the deoxyribonucleic acid (DNA), where genetic information is stored, and proteins, which perform the necessary functions within the cell. Traditionally, the structural and functional properties of RNA are closely linked to gene expression. However, RNA-based enzymes, called ribozymes, are also involved in catalysis and small RNAs regulate key cellular processes, such as cell growth, division, differentiation, aging and death. RNA is a sensitive macromolecule that can be easily damaged by environmental conditions (ultraviolet radiation, oxidative stress) and biological factors (ribonucleases, ribotoxins, CRISPR-Cas systems). Therefore, cells have developed mechanisms to protect and/or repair RNA molecules. This book presents an overview of the biology of RNA damage, protection and repair in prokaryotes and eukaryotes. Individual chapters cover the expression regulation, enzymology and physiological role of such systems, and link them to important human diseases such as cancer and degenerative diseases.

Most bioactive compounds have antioxidant activity, particularly tocochromanols, phenolics (flavonoids and phenolic acids), methylxantines and capsaicinoids. Some of these compounds have also other properties important for human health. For example, vitamin E protects against oxidative stress, but it is also known for its "non-antioxidant" functions, including cell signalling and antiproliferation. Selenium compounds and indoleamins are the components of the antioxidant enzymes. Selenium makes vitamin E acquisition easier and controls its physiological functions. In taking part in enzymatic reactions and protecting the cell against free radicals, selenium shows immunomodulative, antiphlogistic, and antiviral activity. Capsaicinoids possess not only antioxidant, but also antibacterial, analgesic, weight-reducing and thermoregulation properties. Studies have also demonstrated their gastroprotective and anticancer properties. Analytical Methods in the Determination of Bioactive Compounds and Elements in Food explores both the influence of particular compounds on human health and the methods used for their determination. Chapters describe various aspects of food and plant analysis, including chromatographic and non-chromatographic approaches as well as hyphenated techniques. Readers of this book will gain a comprehensive understanding of the important groups of bioactive compounds relevant to human health.

Scientific output in low- and middle-income countries is greatly challenged by numerous factors. This is particularly pronounced in sub-Saharan African countries, despite the continent being the world's second largest and second most-populous continent, currently undergoing rapid economic growth. Financial constraints and unclear areas of focus when funding is available, are among the limiting factors, with the consequence being the development of inadequate policies, especially those relating to environmental protection and conservation. This 13-chapter book is a unique piece in the field of microbiology, designed to stimulate some research areas in Africa by illustrating interesting and informative examples of the current applied research agenda in environmental microbiology in selected countries within the continent. With authors from the North, South, East and West of Africa, the book touches diverse applied methods and approaches to meet the pragmatic needs faced by environmental microbiologists in Africa. Also included are topics on viruses, bacteria (including cyanobacteria), and protozoa, and their importance in disease. Sustainable agriculture and aquaculture, and eco-friendly oil and hydrocarbon bioremediation and degradation approaches are highlighted. Microbial involvement in different common indoor (e.g., household kitchens, latrines, and hospitals) and outdoor settings including air, soil, and water habitats, and their resistance to commonly used antibiotics, are described. Hopefully, the work presented here will stimulate the need for increasing modern training and funding initiatives to prepare African microbiologists to meet the challenges they face in African universities and research laboratories.

Refinement in sequencing technologies and potential of genomic research resulted in meteoric growth of biological information such as sequences of DNA, RNA and protein requiring databases for efficient storage, management and retrieval of the biological information. Also, computational algorithms for analysis of these colossal data became a vital aspect of biological sciences. The work aims to show the process of turning bioscience innovation into companies and products, covering the basic science, the translation of science into technology. Due to rapid developments, there seems to be no basic difference between the pharmaceutical industry and the biotechnological industry. However, approved products in the pipeline and renewed public confidence make it one of the most promising areas of economic growth in the near future. India offers a huge market for the products as well as cheap manufacturing base for export. The book is a sincere work of compilation of new and recent advances in the topic of concern through various innovative researches and scientific opinion therefrom. The book is dedicated to the readers who will definitely find it interesting and knowledgeable in carrying out their respective researches in different aspects of applied microbiology and biotechnology.