Advances in Applied Microbiology, Volume 119 continues the comprehensive reach of this widely read and authoritative review source in microbiology. Users will find invaluable references and information on a variety of areas relating to the topics of microbiology.

This book explores fascinating topics at the edge of life, guiding the reader all the way from the relation of life processes to the second law of thermodynamics and the abundance of complex organic compounds in the universe through to the latest advances in synthetic biology and metabolic engineering. The background to the book is the extraordinary scientific adventures that are being undertaken as progress is made toward the creation of an artificial cell and the control of life processes. This journey involves input from research areas as diverse as genetic engineering, physical chemistry, and information theory. Life is to be thought of not only as a chemical event but also as an information process, with the genome a repository of information gathered over time through evolution. Knowledge of the mechanisms affecting the increase in complexity associated with evolutionary paths is improving, and there appear to be analogies with the evolution of the technologies promoting the development of our society. The book will be of wide interest to students at all levels and to others with an interest in the subject.

Published since 1959, "Advances in Applied Microbiology" continues to be one of the most widely read and authoritative review sources in microbiology.

The series contains comprehensive reviews of the most current research in applied microbiology. Recent areas covered include bacterial diversity in the human gut, protozoan grazing of freshwater biofilms, metals in yeast fermentation processes and the interpretation of host-pathogen dialogue through microarrays.

Eclectic volumes are supplemented by thematic volumes on various topics, including Archaea and sick building syndrome. Impact factor for 2012: 4.974.

Key features:

* Contributions from leading authorities * Informs and updates on all the latest developments in the field

There is an increasing interest of biotechnologists in the potential of cold-adapted organisms, since they play a major role in the processes of nutrient turnover and primary biomass production in cold ecosystems. Essential advantages of the application of such organisms are the rapid microbial metabolism at low temperatures, the low activation energy for enzymatic substrate hydrolysis and the low thermostability of enzymes from cold-adapted organisms. Benefits can also be deduced from the frost hardiness and frost resistance of cold-adapted plants and animals.

This important reference is the first comprehensive resource worldwide that reflects research achievements in neglected and underutilized crop biotechnology, documenting research events during the last three decades, current status, and future outlook. This book has 16 chapters divided into 4 sections. Section 1 has three chapters dealing with Chenopodium as a potential food source, thin cell layer technology in micropropagation of Jatropha, and Panax vietnamensis. Section 2 deals with molecular biology and physiology of Haberlea rhodopensis, cell trait prediction in vitro and in vivo of legumes, and application of TILLING in orphan crops. Section 3 has five chapters on biotechnology of neglected oil crops, Quinoa, Erucia sativa, Stylosanthes, and Miscanthus. And Section 4 contains five chapters mainly on genetic transformation of Safflower, Jatropha, Bael, and Taro. This section also includes a chapter on genetic engineering of Mangroves.

The existence of life at high temperatures is quiet fascinating. At elevated temperatures, only microorganisms are capable of growth and survival. A variety of microbes survive and grow at such high temperatures. Many thermophilic microbial genera have been isolated from man-made (washing machines, factory effluents, waste streams and acid mine effluents) and natural (volcanic areas, geothermal areas, terrestrial hot springs, submarine hydrothermal vents, geothermally heated oil reserves and oil wells, sun-heated litter and soils/sediments) thermal habitats throughout the world. Both culture-dependent and culture-independent approaches have been employed for understanding the diversity of microbes in hot environments. These organisms not only tolerate such high temperatures but also usually require these for their growth and survival. They are known as thermophiles/thermophilic microbes, which include a wide variety of prokaryotes (Bacteria and Archaea) as well as eukaryotes (Fungi, Algae, Protozoa). Interest in their diversity, ecology, and physiology has increased enormously during the past few decades as indicated by the deliberations in international conferences on extremophiles and thermophiles every alternate year. The Phylogenetic relationship of the known microorganisms indicates the presence of thermophilic microorganisms at the position close to the Last Universal Common Ancestor (LUCA). It is widely accepted that metal-reducing microorganisms have a large impact on the geochemistry of subsurface environments through the cycling of metals and organic matter, and thereby affect water quality and taste. Furthermore, metal-reducing micro-organisms have potential applications in bioremediation, mineral leaching and energy generation processes and are of evolutionary interest as metal reduction is considered to be a very ancient form of respiration. Protein characterization surprisingly indicated that possible additional functionality and alternate site promiscuity could contribute to the diverse biochemical abilities of the bacteria, especially with respect to microbe-metal interactions. Thermophilic bacteria are also able to reduce a wide spectrum of other metals including Mn (IV), Cr (VI), U (VI), Tc (VII), Co (III), Mo (VI), Au (I, III), and Hg (II) which can be used for immobilization of toxic metals/radionuclides, e.g. for the bioremediation of hot waste water of disposal sites of radioactive wastes having temperature range favorable for thermophiles for a long period of time. The main sources of CO in hot environments inhabited by anaerobic thermophiles are volcanic exhalations and thermal degradation of organic matter. A number of phylogenetically diverse anaerobic prokaryotes, both Bacteria and Archaea, are known to metabolize CO. CO transformation may be coupled to methanogenesis, acetogenesis, hydrogenogenesis, sulfate or ferric iron reduction. The key enzyme of anaerobic CO utilization, the Ni-containing CO dehydrogenase, is synthesized in hydrogenogens as an enzyme complex with the energy-converting hydrogenase. The genomic analysis shows this enzymatic complex to be encoded by a single gene cluster. Themophilic moulds and bacteria have been extensively studied in plant biomass bioconversion processes, as sources of industrial enzymes and as gene donors for the heterologous expression of thermostable enzymes. In the development of third generation biofuels such as bioethanol, thermophilic fungal and bacterial enzymes are of particular interest. The entire genomes of several thermophilic bacteria and archaea have already been sequenced. The analysis of the genomic data provided resources for novel and useful proteins and enzymes. The entire genomic data have also provided specific feature of microbes and important information on the evolution of thermophilic microorganisms. In some thermophilic archaea, multiple types of chaperonins have been identified. The chaperonins have been found to change according to the environmental conditions, suggesting that the mechanism for maintaining correct structure of thermostable proteins in the thermophilic archaea is regulated by changing chaperonine molecules. These organisms have evolved several structural and chemical adaptations, which allow them to survive and grow at elevated temperatures. Thermostable enzymes play an important role in the biosynthesis of fine chemicals. They are generally more robust against the conditions of industrial biocatalysis utilized by the industry, which can be solvent based or at elevated temperatures. Many non-natural industrially interesting substrates are often not soluble under aqueous conditions and at ambient temperatures. The thermophilic Archaea are a good source of these enzymes, which have been cloned and over-expressed in Escherichia coli. These include alcohol dehydrogenases for chiral alcohol production, aminoacylases for optically pure amino acids and amino acid analogues, transaminases for chiral amine production and gamma lactamases for chiral gamma lactam building blocks which are subsequently incorporated into carbocyclic nucleotides. Considerable interest has been generated in the mechanism that nature utilizes to increase the stability of enzymes found in thermophilic and hyperthermophilic species. A comparative approach has been used to carry out a detailed study of specific enzymes from a range of organisms in order to understand acquired stability at a structural level. A directed or site-specific mutagenesis approach has been used for stabilizing mesophilic proteins. The specific mutations have been introduced by looking at the most primitive forms of life, which are thought to have evolved in a thermophilic environment. The book is aimed at bringing together scattered up-to-date information on various aspects of thermophiles such as the diversity of thermophiles and viruses of thermophiles, their potential roles in pollution control and bioremediation, composting and microb

The discovery of ribozymes nearly 30 years ago triggered a huge interest in the chemistry and biology of RNAs. Much of the recently made progress focusing on metal ions is addressed in MILS 9. This book, written by 28 internationally recognized experts from 8 nations, provides a most up-to-date view and is thus of special relevance for colleagues teaching courses in biological inorganic chemistry and for researchers dealing, e.g., with nucleic acids, gene expression, and enzymology, but also for those in analytical and bioinorganic chemistry or biophysics. Structural and Catalytic Roles of Metal Ions in RNA describes in an authoritative and timely manner in 12 stimulating chapters, supported by nearly 1600 references, 13 tables, and 75 illustrations, mostly in color, metal ion-binding motifs, methods to detect and characterize metal ion-binding sites, and the role of metal ions in folding and catalysis. It deals with diffuse metal ion binding, RNA quadruplexes, the regulation of riboswitches, metal ions and ribozymes, including artificial ribozymes. The spliceosome, the ribosome, ribozymes involving redox cofactors as well as the binding of kinetically inert metal ions to RNA are also covered.

Polymers are important and attractive biomaterials for researchers and clinical applications due to the ease of tailoring their chemical, physical and biological properties for target devices. Due to this versatility they are rapidly replacing other classes of biomaterials such as ceramics or metals. As a result, the demand for biomedical polymers has grown exponentially and supports a diverse and highly monetized research community. Currently worth $1.2bn in 2009 (up from $650m in 2000), biomedical polymers are expected to achieve a CAGR of 9.8% until 2015, supporting a current research community of approximately 28,000+.

Summarizing the main advances in biopolymer development of the last decades, this work systematically covers both the physical science and biomedical engineering of the multidisciplinary field. Coverage extends across synthesis, characterization, design consideration and biomedical applications. The work supports scientists researching the formulation of novel polymers with desirable physical, chemical, biological, biomechanical and degradation properties for specific targeted biomedical applications.
Combines chemistry, biology and engineering for expert and appropriate integration of design and engineering of polymeric biomaterials Physical, chemical, biological, biomechanical and degradation properties alongside currently deployed clinical applications of specific biomaterials aids use as single source reference on field. 15+ case studies provides in-depth analysis of currently used polymeric biomaterials, aiding design considerations for the future

"Animal Biotechnology" introduces applications of animal biotechnology and implications for human health and welfare. It begins with an introduction to animal cell cultures and genome sequencing analysis and provides readers with a review of available cell and molecular tools. Topics here include the use of transgenic animal models, tissue engineering, nanobiotechnology, and proteomics. The book then delivers in-depth examples of applications in human health and prospects for the future, including cytogenetics and molecular genetics, xenografts, and treatment of HIV and cancers. All this is complemented by a discussion of the ethical and safety considerations in the field.

Animal biotechnology is a broad field encompassing the polarities of fundamental and applied research, including molecular modeling, gene manipulation, development of diagnostics and vaccines, and manipulation of tissue. Given the tools that are currently available and the translational potential for these studies, animal biotechnology has become one of the most essential subjects for those studying life sciences.
Highlights the latest biomedical applications of genetically modified and cloned animals with a focus on cancer and infectious diseasesProvides firsthand accounts of the use of biotechnology tools, including molecular markers, stem cells, andtissue engineering"

This book critically assesses the current state of knowledge on new and important detection technologies, e.g. mass spectrometry, tandem mass spectrometry, biosensor detection and tissue imaging, in connection with toxic chemical and biological agents. In general, the main topics discussed concern the risks and consequences of chemical and biological agents for human health in general, with special emphasis on all biochemical and metabolic pathways including the reproductive system. The exposome, genetic risks and the environment, various health hazard agents, risk assessment, environmental assessment and preparedness, and analysis of sub-lethal effects at the molecular level are also discussed. In closing, the book provides comprehensive information on the diagnosis of exposure, and on health concerns related to toxic chemical and biological agents.

Plant genomics and biotechnology have recently made enormous strides, and hold the potential to benefit agriculture, the environment and various other dimensions of the human endeavor. It is no exaggeration to claim that the twenty-first century belongs to biotechnology. Knowledge generation in this field is growing at a frenetic pace, and keeping abreast of the latest advances and calls on us to double our efforts. Volume II of this two-part series addresses cutting-edge aspects of plant genomics and biotechnology. It includes 37 chapters contributed by over 70 researchers, each of which is an expert in his/her own field of research. Biotechnology has helped to solve many conundrums of plant life that had long remained a mystery to mankind. This volume opens with an exhaustive chapter on the role played by thale cress, Arabidopsis thaliana, which is believed to be the Drosophila of the plant kingdom and an invaluable model plant for understanding basic concepts in plant biology. This is followed by chapters on bioremediation, biofuels and biofertilizers through microalgal manipulation, making it a commercializable prospect; discerning finer details of biotic stress with plant-fungal interactions; and the dynamics of abiotic and biotic stresses, which also figure elsewhere in the book. Breeding crop plants for desirable traits has long been an endeavor of biotechnologists. The significance of molecular markers, marker assisted selection and techniques are covered in a dedicated chapter, as are comprehensive reviews on plant molecular biology, DNA fingerprinting techniques, genomic structure and functional genomics. A chapter dedicated to organellar genomes provides extensive information on this important aspect. Elsewhere in the book, the newly emerging area of epigenetics is presented as seen through the lens of biotechnology, showcasing the pivotal role of DNA methylation in effecting permanent and transient changes to the genome. Exclusive chapters deal with bioinformatics and systems biology. Handy tools for practical applications such as somatic embryogenesis and micropropagation are included to provide frontline information to entrepreneurs, as is a chapter on somaclonal variation.Overcoming barriers to sexual incompatibility has also long been a focus of biotechnology, and is addressed in chapters on wide hybridization and hybrid embryo rescue. Another area of accomplishing triploids through endosperm culture is included as a non-conventional breeding strategy. Secondary metabolite production through tissue cultures, which is of importance to industrial scientists, is also covered. Worldwide exchange of plant genetic material is currently an essential topic, as is conserving natural resources in situ. Chapters on in vitro conservation of extant, threatened and other valuable germplasms, gene banking and related issues are included, along with an extensive account of the biotechnology of spices - the low-volume, high-value crops. Metabolic engineering is another emerging field that provides commercial opportunities. As is well known, there is widespread concern over genetically modified crops among the public. GM crops are covered, as are genetic engineering strategies for combating biotic and abiotic stresses where no other solutions are in sight. RNAi- and micro RNA- based strategies for crop improvement have proved to offer novel alternatives to the existing non-conventional techniques, and detailed information on these aspects is also included. The book's last five chapters are devoted to presenting the various aspects of environmental, marine, desert and rural biotechnology. The state-of-the-art coverage on a wide range of plant genomics and biotechnology topics will be of great interest to post-graduate students and researchers, including the employees of seed and biotechnology companies, and to instructors in the fields of plant genetics, breeding and biotechnology.

Volume 8, solely devoted to the toxicology of metals and metalloids as well as their compounds, focuses on human health. Not surprisingly, all related research areas are rapidly developing due to the role of metals and metalloids in the environment, for the work place, for food and water supply, etc. Written by 40 internationally recognized experts, the 14 stimulating chapters provide an authoritative and timely resource for scientists working in the wide range from analytical, physical, inorganic, and environmental biochemistry all the way through to toxicology, physiology, and medicine. Volume 8 highlights, supported by nearly 1900 references, in a comprehensive and timely manner the principles of risk assessment regarding the effects of metals on human health. It examines how metal ions and their compounds affect the pulmonary, cardiovascular, gastrointestinal (including liver), hematological, immune, and neurological systems, the kidney, skin and eyes, as well as human reproduction and development. MILS-8 terminates with the role of metal ions as endocrine disrupters, in genotoxicity, and cancer risk.

This volume is comprised of 18 chapters, covering various aspects of DNA modification and RNA modified bases. It also discusses in detail circular RNA, therapeutic oligonucleotides and their different properties. The chemical nature of DNA, RNA, protein and lipids makes these macromolecules easily modifiable, but they are also susceptible to damage from both endogenous and exogenous agents. Alkylation and oxidation show a potential to disrupt the cellular redox equilibrium and cause cellular damage leading to inflammation and even chronic disease. Furthermore, DNA damage can drive mutagenesis and the resulting DNA sequence changes can induce carcinogenesis and cancer progression. Modified nucleosides can occur as a result of oxidative DNA damage and RNA turnover, and are used as markers for various diseases. To function properly some RNA needs to be chemically modified post-transcriptionally. Dysregulation of the RNA-modification pattern or of the levels of the enzymes that catalyze these modifications alters RNA functionality and can result in complex phenotypes, likely due to defects in protein translation. While modifications are best characterized in noncoding ribonucleic acids like tRNA and rRNA, coding mRNAs have also been found to contain modified nucleosides. This book is a valuable resource, not only for graduate students but also researchers in the fields of molecular medicine and molecular biology.

This book reviews efforts to produce chemicals and fuels from forest and plant products, agricultural residues and more. Algae can potentially capture solar energy and atmospheric CO2; the book details needed research and legislative initiatives.

As the demand for herbal medicines is increasing globally, the supply of medicinal plants is declining because most of this harvest is derived from wild and naturally growing resources. The genetic improvement of medicinal plants to produce higher yields and more active ingredients might help fulfil the increasing demand for medicinal plants. Medicinal plants are one of the most important sources of life-saving drugs for the world’s population. Increasing global demand for herbal medicines is accompanied by a dwindling supply of medicinal plants due to over-harvesting. Biotechnological interventions play a significant role in the improvement of crop yields and quality. Despite such progress in plant molecular biology, only limited biotechnology application has been seen in medicinal plants. Recent breakthroughs in high-throughput approaches have revolutionized this research area and shifted the focus towards omics approaches, such as genomics, transcriptomics, proteomics, and metabolomics. This book discusses these technologies. Currently, there is no existing publication that focuses on omics and medicinal plants.

Transport phenomena in porous media continues to be a field which attracts intensive research activity. This is primarily due to the fact that it plays an important and practical role in a large variety of diverse scientific applications. "Transport Phenomena in Porous Media II" covers a wide range of the engineering and technological applications, including both stable and unstable flows, heat and mass transfer, porosity, and turbulence.

"Transport Phenomena in Porous Media II" is the second volume in a series emphasising the fundamentals and applications of research in porous media. It contains 16 interrelated chapters of controversial, and in some cases conflicting, research, over a wide range of topics. The first volume of this series, published in 1998, met with a very favourable reception. "Transport Phenomena in Porous Media II" maintains the original concept including a wide and diverse range of topics, whilst providing an up-to-date summary of recent research in the field by its leading practitioners.

The occurrence of a wide variety of metal-carbon bonds in living organisms, ranging from bacteria to humans, is only recently recognized. Of course, the historical examples are the B12 coenzymes containing cobalt-carbon bonds, but now such bonds are also known for nickel, iron, copper, and other transition metal ions. There is no other comparable book; MILS-6, written by 17 experts, summarizes the most recent insights into this fascinating topic.